| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1253 |
|---|
| Symbol | |
|---|
| ID | 4678331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 1256178 |
|---|
| End bp | 1258478 |
|---|
| Gene Length | 2301 bp |
|---|
| Protein Length | 766 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639843771 |
|---|
| Product | serine protease, subtilase family protein |
|---|
| Protein accession | YP_990851 |
|---|
| Protein GI | 121596647 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4934] Predicted protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGAAA TCGTGTTGTC CGCCGTGTTT GTCCGCCGCG TTGTCCGCAA TCGCAACGAC
ACGCGGCCCG ATGCAACGCC GTGCGGGTCG CGGAACGGTT TGCGGCGCAT CGAACGCGGT
CTTTTCGCGC GCCATATGAA TGGGATTCCT AAGCATTTGA CGCGCGGCGG CCGTATGTGC
CGGGTCCGCT CGGCGCGCAC GCCGGGCGAA ACGGCACCGC GCCGCCGCCG TCCATCGAAG
GGAGAAAATC ATGTCACCGT GAACGCCCGC CTCGCCGCAT CGCCATGCAT CGGCTGCACG
CCGCGCGTCC CTATCCGCCG GAGCGCGTCG TCGCATCTTT CCTCATCGTT TTCCTGGGGC
TTCAAAATGC AGAGAACTCA GCATGTCAAC CGGCTATTCT CGAAACGCTT CGCGCTGTCG
CCGCTACCGC TGGCGATCGC CGTCGCGCTG TCCCCGCTTC TCGCGCACGC GGCGCCCGAC
TGGGTGCCCA CCCGCACCGA CGCGTTCCTG ATCGCGCGCG CGCCCGCCGC GGCCGCCTCG
CAGACGCTCG CGAAGACCGC GCCGAGCTAC GCGCTCAACA TGATCGGCAC GCCCGAGCTC
GCCGACACGA ATGTCACGCC GCTCGAGCTG AGCCAGCCGC TGCGCGTGAC CATCGTGCTG
AAAAGCCGCA ACGAAGCGCA GCTCGATTCG CTCGTGCGCG AAGTGAACCA GCCGGGCAGC
GCGAACTATC GCAAGTACCT CACGCCCGAG CAGTTCAAGG CGCGCTTCGC GCCGACCGAC
GCCCAGGTGC GGGCCGTCGT CGCGCATCTG AAGGCGAACG ACTTCGGCGA CATCACGGTG
TCGGCGAACA ACAAGCTGAT CTTCGCGCAA GGCAACGCGT CGAACGCGGA ACGCGGCTTC
CACACGACGC TCAAGCGCTT CAGCTATCGC GGCAAGGCGG TCTATGCGAA CGACTCGGCC
GCGCTCGTTC CCGCATCGCT GAGCCCGGTC GTCGAATCGG TGCTCGGGCT GCAGAGCGCG
GCCGTTCCGC ATCGGCTCAT CCATCGCGGC ACGCCGGCCG ACGCGCGCAT CCAGACCGAC
GCGATCACGA AGAACGCGAC GGCGAGCGGC ACGCAAACCG GCCATCAGCC GACCGATTTC
GCGCAGATCT ACAATGCGAG CGGCCTGCCC GCCGCGACCA ACACGACGGT CGGGATCATC
ACGTGGGGCG ACATGACGCA GACGATCGCC GATCTGAACA CGTTCACGCG AAACGCGGGC
CTGCCGAACG TGAACACCGC GGTCGTCGCG GGCAGCTCGG GCACGCTCGC GGACGACGGC
GATCCGGGCG AATGGGATCT CGACAGCCAG ACGATCATCG GCACGTCGGG CGGCGTGAAG
CAATTGATCT TCTATGCGGC CGTCAACGGC GACAGCAACG ACAGCGGCCT CACCAACGCG
ACGCTGACCG CCGCATACAA CAAGGCCGTC ACCGACAACG TCGCGAAGGT GATCAACGTA
TCGCTCGGCG AGGACGAGGC GGCCGCGAAT TCGGACGGCT CGCTCGCCGC GAACGACGCG
GTATTCAAGC AGGCGGTCGC GCAAGGGCAG ATCTTCTCGG TGTCGTCCGG CGACGCGGGC
GTCTATCAGT GGTCGACTTC GCCATACGGC GCGCCGGGCT ACGTCGGCAC CTACAGCGGC
GGCAAGGTGA CGACGAAGAT CAATCTGGCG AAGTACAGCG TGTCGTCGCC GGCGAGCTCG
CCGTACGTCG TCGCGGTCGG CGGCACGACG TTGTCGACGA GCGGCACGAC GACCTGGGCC
GGCGAGACCG TCTGGAACGA AGGGCTCGCC TACGCGGACG TGAGCAGCAG CGGCCAGCCG
CTCGACAACG CGGTGCGGCT ATGGGCGACG GGCGGCGGCG TGAGCGGCTA CGAAGCGGCG
CCGAGCTGGC AGACGGCCGC GCTCGGCAGC TCGGTGACGA AGCGCGTCGT GCCGGACGTC
GCGTTCGACG CCGCGCAATC GACGGGCGCG TATCTCGTGA TCAACGGCCA GCCGAACCAG
TTGGTCGGCG GCACGAGCCT CGCGTCGCCG ATCTTCGTCG GCGGCTGGGC GCGCGTGGAA
TCGGCGAACG GCAACGGTCT CGGCCTGCCA ACGTCGGCGT TCTACCAGGG CCTGCCGGGC
AATCCGTCGC TCGTCCACGA CGTGACGTCG GGTAACAACG GCTACAACAG CTACGGCTAC
AGCGCGAAAT CCGGATGGGA CGACGACACC GGCTTCGGCA GTCTCGACTT CGCGAAGGTC
AGCGCGAGCT CGGTCAAGTA G
|
|---|
| Protein sequence | MKEIVLSAVF VRRVVRNRND TRPDATPCGS RNGLRRIERG LFARHMNGIP KHLTRGGRMC
RVRSARTPGE TAPRRRRPSK GENHVTVNAR LAASPCIGCT PRVPIRRSAS SHLSSSFSWG
FKMQRTQHVN RLFSKRFALS PLPLAIAVAL SPLLAHAAPD WVPTRTDAFL IARAPAAAAS
QTLAKTAPSY ALNMIGTPEL ADTNVTPLEL SQPLRVTIVL KSRNEAQLDS LVREVNQPGS
ANYRKYLTPE QFKARFAPTD AQVRAVVAHL KANDFGDITV SANNKLIFAQ GNASNAERGF
HTTLKRFSYR GKAVYANDSA ALVPASLSPV VESVLGLQSA AVPHRLIHRG TPADARIQTD
AITKNATASG TQTGHQPTDF AQIYNASGLP AATNTTVGII TWGDMTQTIA DLNTFTRNAG
LPNVNTAVVA GSSGTLADDG DPGEWDLDSQ TIIGTSGGVK QLIFYAAVNG DSNDSGLTNA
TLTAAYNKAV TDNVAKVINV SLGEDEAAAN SDGSLAANDA VFKQAVAQGQ IFSVSSGDAG
VYQWSTSPYG APGYVGTYSG GKVTTKINLA KYSVSSPASS PYVVAVGGTT LSTSGTTTWA
GETVWNEGLA YADVSSSGQP LDNAVRLWAT GGGVSGYEAA PSWQTAALGS SVTKRVVPDV
AFDAAQSTGA YLVINGQPNQ LVGGTSLASP IFVGGWARVE SANGNGLGLP TSAFYQGLPG
NPSLVHDVTS GNNGYNSYGY SAKSGWDDDT GFGSLDFAKV SASSVK
|
|---|
| |