| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0550 |
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| Symbol | |
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| ID | 4677558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 553975 |
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| End bp | 557316 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639843076 |
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| Product | Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase |
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| Protein accession | YP_990159 |
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| Protein GI | 121597394 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0019] Diaminopimelate decarboxylase
[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCACC CCGACGCAGA TCAAGAACAC GAAAGACAAC TGATTGCATG TGGTCGTGAA
CAATACGAAT GGGTGGTCCG CGCGCGCGAG GCAGCCGCGT CGTCGCTGGC CGACTGGGAC
GCGCGGGCCG AGGCCCTGCT CGACGGCGTG CGCGGGATGC CCGCGCATTT CGACCATGCC
GCCGCGCGCT ACGCGGCACG AACCGGCGAG CCGTTGACGC TCGACCACGC GCGCGCGTTC
TGCGCGGCGA CGATGCTGCG CGCGGTCGAA CACCCCGCCG GAACCGACGA CTGGCATCTC
CTTTGCCGAT TGGACGAGAT ACCGGACATC GGCGACTACG TCACGGGCTA CGCGTTTCAG
GAAAGCATGA CGGCGGTCCG CGCGAGCGAG CACGAGGTCC GCGTGTTCCT GAACGTCTGC
CCTCATCGGC AGACGCAGCT CTTTCAGGCC GCCGGCTCGT TCGATCCGCA TCGGCACGTT
CGATGTCCGT ATCACGGCTG GACCTTCGAC GTCGACGGGC GCTGCGTGAA CGCGCCGGGC
GCGCGACGCT GCGAGTTCGG CGCGGACTTC CGCGAGCAGG ATTTTTCCCT GTCGCGCGTG
CCGGCTCGCG TCGAGGACGG CGGCATCCTC GTGCGCAAGG CGGTCTCGCG CGTCGGCCGC
CGCATGGCGG CGCTGTACGA GCGCGTGTAT TTCGCGTTCC CCGACGTCAA GCGCCCGTTC
GTGCCGGACC GCTTTCGCGT GCTGCTGCGC ATCGGCTTTC TCGCGGCCGA CATCCGGCAG
GCGCGCGATT CGTCGATCCT GTCGGCGCTT CGCGCCGAAC TGCGTCAGCA TCTGCTGACC
TATCCGGACC TGCCGGTGCG CTACGCGTCG CTCGCGAAAC GACATGGCGA GCCGACGGTC
GATGCCGTCG ATGCCGTCGA TGCCGTCGAT GCCGTCGACC TCGGCCCCCG GCTCGCGGGC
GGCCCGCTGC GCGAGACCGT GGCCACCTGG GTCTACGGCG ACGCGGAGTT GCACGCGCTC
GAACGGGACA CGCTCGTGCT GCCCGCGTGG CACTTCGTCG GCCACGTCGC GGAACTGCGC
GGCGGCGAGC GCACGTTGAC GCTCGACGTG TCGGGCGAGC GCGCATACGT CTGCCGAGCG
CGCGACGGCA CGATCCATGC GGGCCGCCTC GTCGACATCG ACCGTCGCAC CGACGACCCG
GCACGGCTGC GCGCGGACGG CGCGCTCGCG CCGATCGACG TCGATGTCTG GCAGGGGCTG
ATATTCGTGC GCCTCGCGGC CGGCCGGGGC GGGGTCGCCG ATATCTGGGA GCATGCGCGG
ATGCTCGAGC CATACCGGAT CGGGCAGATG GCACCGCTCG CCGGCAAGGG CTGGTACGAC
TTCGCCGTCG AAGCGGACGC AAAGATTCTC TGGGAAAACT TCCTCGAGAT GTACCACTTC
CCGGCGGCGC ACCAGGCGAT GATCCGCTTG TTCGAGCTGT CGAGCCGCTC CGATCTGCTG
ACGCTGCGCG AACCGGCCTC GACGCGGCTG TCGCCCATCG AGGCGCGCTA CCGCGACGCA
TTGAAACGCG GCGCGACACA CGGCGCGGAC GAGGAAGCGC GGCAACGCGC GATGGCCGAT
GGCGACGCCG CCCTCGCGCG CCCGCTCCAG CTGACCGTGT TCGGCTCGAT TCCCGAAACG
GCGCAAACCG CGACGATGCT CGGCATCACG GTCTTTCCCG ATCACATTCA GGCGATGTCG
TTCATTCCGG TCGGCCCGCG GGAATGCCGC GTGAAGATCC GCAGCTACGG CCATGCCGCG
GAAGGCGCGC TCGACATCGC ACGGCAGTGC AACGTCGAGC AGTTGCAGAT CGAGCTCGTC
GAGGAAGACA TTCAGTTGAA CCATCGAAGC CAGATCGCGG CATCGACGCG CAGTTACGAG
CGGCGCGGCG TGCTGCACGA CATGGAAGTG AGCGTCGCCG ATTTCCAGCA ATTGCTGCGG
CGCGTCCTGC CCGTCACACG CTGCGTCCGG CGCCCGCCCG TCGGCGCGCT CGCGCGCGCG
AATCAAGCGC TCAGGCTGCG CGATCGCGAC GAGCGCGGCG CGCCTCGCCG CGCCTGCGCG
GATGCGGCAC GCCGCGCCCG CGCCCCCGCC GCCGCATCGG CCTTTGCCGC GCCGCCGCCT
GCTTCTCGGC AACGCAACGC CGAGACGCTC GAAGCACTCG ATACGCCCGC GTTCGTCTAC
GACGAACGCA CGCTGCGCGA CGCATTGTCT TCGATGCACA CGCTGCTCGG CGACAGCGGC
TGCCGCCTGC TGTATCCGCT CAAGCCGTTT TCGCACGCGG GCGCGCTCGA ATGCATCGGG
CCGCATGTCG ACGGCTTCGC CGCGTCGTCG CCGTTCGAGG CCGCGTTCTC GCGCACGCTT
CTCGGCCGCG CGGGCTCGGT CCACCTCGCG ACGCCGGCGC TGCGCGACCG CGACCTCGGG
ACGATCGTCG ACAACTGCGA CTACGTCGCG CTGAACTCGC TGTCGCAATG GCGGCGCCTG
CACGATGCAT TGGCGGGCCG CCTGTCGTGC GGCTTGCGGA TCAATCCGCA ATATTCGGTC
GTGGCCGACG CGCGCTACGA TCCGTGCCGG CCGCATTCGA AGCTCGGCGT GCCGCTCGAC
GCCATCGAGC GCGTCGTCGC GAGCGATCCG CGCGCGCTGC ACGGCCTGCA GGGCATTCAT
TTCCACACGA ATTGCGACTC CACCGATTTC AGCCGGCTCG CCGAAACGAT CGAGCACCTC
GAAAAGCGGC TCGCGCGCAC GCTCGACGGC CTCGCCTGGA TCAATCTGGG CGGCGGCTAC
ATCGCGGACG GCGCGCGATA CGTCGACCGG TTCCGCGCGT GCGCGAAGCG GCTGCGCGAG
CATTTCGGCG TCGCGCTGTT CATCGAGCCG GGCGCGGCGA TCGTGCGCGC AGCCGGAACG
ATCATCGCCT CCGTCGTCGA CCTGTTCGAC AGCGGCGGCA TGCCGATCGC CGTGCTCGAC
ACGACGGTCA ATCACTATCC CGAGGTATTC GAATACCAGT TTCAGCCGGA TGTCGACGGG
CATCACCCGG CGCACGCGCA CGCCTACCTG CTGGCCGGCG CTTCGTGCCT CGCCGGGGAC
GTGTTCGGCA CCTACCGCTT CGACGCGCCG TTGAGGGTGG GCTCGCGGGT CGCGTTCGTG
AACGCGGGCG CCTACACGCT CGTGAAGGCG CATCGCTTCA ACGGCATCAA CCTGCCGAGC
GTCTATCGCA GGGGCGAGGA CGGCGCGCTC GCCGCGGTCC AGCGGTTTTC CTACGAAGAT
TTTCTTCGCC AAAACGGGGG GCTCGACCAT GCATATCCAT GA
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| Protein sequence | MDHPDADQEH ERQLIACGRE QYEWVVRARE AAASSLADWD ARAEALLDGV RGMPAHFDHA
AARYAARTGE PLTLDHARAF CAATMLRAVE HPAGTDDWHL LCRLDEIPDI GDYVTGYAFQ
ESMTAVRASE HEVRVFLNVC PHRQTQLFQA AGSFDPHRHV RCPYHGWTFD VDGRCVNAPG
ARRCEFGADF REQDFSLSRV PARVEDGGIL VRKAVSRVGR RMAALYERVY FAFPDVKRPF
VPDRFRVLLR IGFLAADIRQ ARDSSILSAL RAELRQHLLT YPDLPVRYAS LAKRHGEPTV
DAVDAVDAVD AVDLGPRLAG GPLRETVATW VYGDAELHAL ERDTLVLPAW HFVGHVAELR
GGERTLTLDV SGERAYVCRA RDGTIHAGRL VDIDRRTDDP ARLRADGALA PIDVDVWQGL
IFVRLAAGRG GVADIWEHAR MLEPYRIGQM APLAGKGWYD FAVEADAKIL WENFLEMYHF
PAAHQAMIRL FELSSRSDLL TLREPASTRL SPIEARYRDA LKRGATHGAD EEARQRAMAD
GDAALARPLQ LTVFGSIPET AQTATMLGIT VFPDHIQAMS FIPVGPRECR VKIRSYGHAA
EGALDIARQC NVEQLQIELV EEDIQLNHRS QIAASTRSYE RRGVLHDMEV SVADFQQLLR
RVLPVTRCVR RPPVGALARA NQALRLRDRD ERGAPRRACA DAARRARAPA AASAFAAPPP
ASRQRNAETL EALDTPAFVY DERTLRDALS SMHTLLGDSG CRLLYPLKPF SHAGALECIG
PHVDGFAASS PFEAAFSRTL LGRAGSVHLA TPALRDRDLG TIVDNCDYVA LNSLSQWRRL
HDALAGRLSC GLRINPQYSV VADARYDPCR PHSKLGVPLD AIERVVASDP RALHGLQGIH
FHTNCDSTDF SRLAETIEHL EKRLARTLDG LAWINLGGGY IADGARYVDR FRACAKRLRE
HFGVALFIEP GAAIVRAAGT IIASVVDLFD SGGMPIAVLD TTVNHYPEVF EYQFQPDVDG
HHPAHAHAYL LAGASCLAGD VFGTYRFDAP LRVGSRVAFV NAGAYTLVKA HRFNGINLPS
VYRRGEDGAL AAVQRFSYED FLRQNGGLDH AYP
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