Gene BMAA1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1978 
Symbol 
ID3086147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand+ 
Start bp2165721 
End bp2166767 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID637565845 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_106500 
Protein GI53716115 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0857049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGACC CCGAACGCAA GCGCATTCTC GTCACGGGCG GCGCCGGCTT TCTCGGCTCG 
CACCTGTGCG AGCGGCTCGT CGCCGAAGGC CACGACGTGC TGTGCGTCGA CAATTTCTAC 
ACCGGCGCGA AGGACAATAT CGCGCATCTG CTCGACGCGC CGAACTTCGA GCTGATGCGG 
CACGACGTGA CGTTTCCGCT GTACGTCGAG GTCGACGAGA TCTATAACCT CGCGTGCCCC 
GCATCGCCCG TGCACTACCA GCGCGACCCG GTGCAGACGA CGAAGACGAG CGTGCACGGC 
GCGATCAACA TGCTCGGGCT CGCGAAGCGC CTGAAGGCGC GCATCCTGCA GGCGTCGACG 
AGCGAAGTGT ACGGCGACCC GGCGTCGCAT CCGCAGCGCG AGAGCTACTG GGGCCACGTG 
AATCCCGTCG GCATACGCGC GTGCTACGAC GAGGGCAAGC GCTGCGCGGA GACGCTGTTC 
GTCGACTATC ACCGGCAATA CGGCGTCGAC ATCCGCATCG CGCGGATCTT CAATACGTAC 
GGCCCGCGCA TGCATCCGGC GGACGGGCGC GTCGTGTCGA ACTTCATCAT GCAGGCGCTC 
GCGGACGCGC CGCTCACCGT GTACGGCGAC GGCCGGCAAA CGCGTGCGTT CTGCTACGTC 
GACGACCTGA TCGACGCGCT GATCCGCCTG ATGGCCGCGC CCGGCCCGAT GCCCGAGCCG 
ATGAACCTCG GCAATGCCGA GGAAGTGTCG ATGCTGCAGA TCGCGCGCGA GGTGGTGCGC 
GTGACGGGCG CGTCGGTCGC GATCGAATTC CGGCCGCTGC CCGCCGACGA TCCGCGCCAG 
CGCTGCCCGG ATCTCGGCTT CGCGCGCGAG CGGCTCGGCT GGCGCGCGAC CACGACGCTC 
GCCGACGGGC TCGCGGCAAC GGTGCGCTAC TTCATCCAGC GGCAGGCGGC GCATCACGCG 
CCGGGCAACC TCGTGCACAG CACGCGGGTT GCGTCGCACA TGCTCGCGCG CGTGAATGCG 
CAGGGGAGAT CGCGCGTCAG CGCGTAG
 
Protein sequence
MKDPERKRIL VTGGAGFLGS HLCERLVAEG HDVLCVDNFY TGAKDNIAHL LDAPNFELMR 
HDVTFPLYVE VDEIYNLACP ASPVHYQRDP VQTTKTSVHG AINMLGLAKR LKARILQAST 
SEVYGDPASH PQRESYWGHV NPVGIRACYD EGKRCAETLF VDYHRQYGVD IRIARIFNTY 
GPRMHPADGR VVSNFIMQAL ADAPLTVYGD GRQTRAFCYV DDLIDALIRL MAAPGPMPEP 
MNLGNAEEVS MLQIAREVVR VTGASVAIEF RPLPADDPRQ RCPDLGFARE RLGWRATTTL 
ADGLAATVRY FIQRQAAHHA PGNLVHSTRV ASHMLARVNA QGRSRVSA