Gene BMAA1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1496 
Symbol 
ID3086434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1629416 
End bp1630198 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID637565382 
Productamino acid ABC transporter, periplasmic amino acid-binding protein 
Protein accessionYP_106091 
Protein GI53717301 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.515934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAA TCTTGGCGGC TTTGACCGTG GCCCTGCTGG CGGTGTCGGC AGGCGGCGTG 
CAGGCGAAGG ATTGGTCGAC GATCCGCTTT GGCGTCGACG CGAGCTACCC GCCTTTCGAA
TCGAAAGGTC CGGACGGCAA GGTGGTCGGC TTCGACGTCG ACCTCGGCAA CGAAATCTGC
AAGCGCGTGA AGGCAAAGTG CGTGTGGATC GAGAACGACT TCGACGGCAT GATCCCGGCG
CTGAAGGCGC GCAAGTTCGA CGGCGTGCTG TCGTCGATGT CGATGACGCC GCAGCGTGAA
GAGCAGATCG CGTTCTCGTC GAAGCTGTTC AACACGCCGA CGCGCCTCGT CACGAAGAAG
GGCGCGAACC TGATGCCGAC GGCCGAATCG CTCAAGGGCA AGACGGTCGG CGTCGAGCAG
GGCACGATCC AGGAAACCTA CGCGAAGGTG CACTGGGCGC CGATGGGCGT GAAGGTGCAA
CCGTACCAGA ACCAGGATCA GGTCTACGCC GACCTGATCG CGGGCCGCCT CGACGCGGCG
CTGCAGGACG CGGTGCAGGC CGACATCGGC TTCCTGAAGA CGCCGCGCGG CAAGGACTAC
GCGTTCGCCG GCACCGACCT CAACGATCCG AAGACGCTCG GCGAAGGCGC GGGCATCGGC
CTGCGCAAGG AAGACACCGA TCTGAAGGCG AAGATCGACA AGGCGATCGC CGACATGCAC
AAGGACGGCA CGTACGACAA GATCGCGAAG AAGTACTTCG ACTTCGACGT CTACGGCAAG
TAA
 
Protein sequence
MKKILAALTV ALLAVSAGGV QAKDWSTIRF GVDASYPPFE SKGPDGKVVG FDVDLGNEIC 
KRVKAKCVWI ENDFDGMIPA LKARKFDGVL SSMSMTPQRE EQIAFSSKLF NTPTRLVTKK
GANLMPTAES LKGKTVGVEQ GTIQETYAKV HWAPMGVKVQ PYQNQDQVYA DLIAGRLDAA
LQDAVQADIG FLKTPRGKDY AFAGTDLNDP KTLGEGAGIG LRKEDTDLKA KIDKAIADMH
KDGTYDKIAK KYFDFDVYGK