Gene BMAA1178.1 details

Gene Information

• Locus tag: BMAA1178.1
• ID: 3086615
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006349
• Strand: +
• Start bp: 1228920
• End bp: 1229522
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637565076
• Product: ribose transport system permease protein RbsC, internal deletion
• Protein accession: YP_105825
• Protein GI: 53717637
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.744822
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGCTGC GCGGCGGCCC ATGGCTTGCG CTCGCGCTCG TGTTCGCGGG CTTTTCCGTC 
AGCTCCCCGC TGTTCGTCAC GTTCGCGAAC CTCGGCAACG TGCTGCAGCA AAGCGCGGTC 
ACCGGCCTGC TCGCGTTCGG CCTGACGATC GTGATGATCG GCGGCGGCGC GGATGCGATC 
AAGGGTGGGC TCGATCTATC GATCGCCGCG AATCTCGGCC TGTGCGCGGC GGTGTTCGCC 
GCCCTCACGC GCGGCGGCCA CGGCGACGCG CTCGCGCTCG CCGCGACTTG CGCGACGGGC 
GTCGCGGTCG GCGCGCTCGC GTCGTGCGCG CTGCTGAGCG GCAGCGCGCC GGGCGCGGGC 
GACTATCTGC TGCCCGTCGT CGCGGCGGTG CTGCTCGGCG TCGTGTTCTC GCGCCGGCTC 
GTGCCGACGA TTCCCGGCAC GCTCGTCGCC GTGCTGTTCG TCGGCCTGCT CGCGAACGGC 
TTCCAGTTGA ACAGCGTGTC GAGCTATTGG GTGAGCGGCG TCGAGGGCGC GCTGATCCTG 
TTCGTCGTCG CGGCCGTCGC GCTGCTGCGC CGGCGCCGCT CGCAGGAAGC ATTCGATGCG 
TGA 

 

Protein sequence

MLLRGGPWLA LALVFAGFSV SSPLFVTFAN LGNVLQQSAV TGLLAFGLTI VMIGGGADAI 
KGGLDLSIAA NLGLCAAVFA ALTRGGHGDA LALAATCATG VAVGALASCA LLSGSAPGAG 
DYLLPVVAAV LLGVVFSRRL VPTIPGTLVA VLFVGLLANG FQLNSVSSYW VSGVEGALIL 
FVVAAVALLR RRRSQEAFDA