| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1136 |
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| Symbol | hpcD |
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| ID | 3087972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei ATCC 23344 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006349 |
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| Strand | - |
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| Start bp | 1191405 |
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| End bp | 1191797 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637565035 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta isomerase |
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| Protein accession | YP_105791 |
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| Protein GI | 53716779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3232] 5-carboxymethyl-2-hydroxymuconate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.838487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCACA TCATCGTCGA ATACACCGCG AACATTCGCG ACGACGCGCG GATACCCGTG
CTGCTCAAGT CGATCAACGA GACGCTGATC GCGCAGGGCG GCGTGTTTCC GACGGGCGGC
ATCCGCTCGC GCGCGATCGA GCTGCAGGAC TACTGCGTCG CGGACGGCAC CGCCGACGAC
GCGTTCGTGC ACGTGACGCT GAAGATCGGC GCGGGCCGCG ACGACGCGAC GAAAAAGGCC
GCGTGCGACG CGCTGTTCGA TGCGATCAAG GCGCACTTCG AGGCGCTCTA TGCGCGGCGC
TATCTCGCGC TGTCGATGGA GCTCGCCGAG TTCAGCGAGA CGGGCTCGTA CAAGCACAAC
AACATCCACG CACGCTACAA GCGCGGCGCG TGA
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| Protein sequence | MPHIIVEYTA NIRDDARIPV LLKSINETLI AQGGVFPTGG IRSRAIELQD YCVADGTADD
AFVHVTLKIG AGRDDATKKA ACDALFDAIK AHFEALYARR YLALSMELAE FSETGSYKHN
NIHARYKRGA
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