Gene BMAA1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1104 
Symbol 
ID3086889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1151154 
End bp1151897 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content73% 
IMG OID637565005 
Productshort chain dehydrogenase/reductase family oxidoreductase 
Protein accessionYP_105767 
Protein GI53716736 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.12325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCA CGCCCCTCAC CCGAGTCGCG CTCGTCACCG GCGCGTCGCG CGGCATCGGC 
GCGGCCGTCG CGCGGCGCCT TGCGCGCGAC GGCTTTTCGG TCGCCGTCAA CTATGCGTCG
AGCGGCGCCG AAGCCGACGC GCTCGTCGCC GAGCTGCGCG CGGGCGGCGC GGCCGCGCTC
GCGGTGCGGG CGGACATCGG GCGCGCGGAC GACGTGCGCC GGATGTTCGA CGCCGTCGAG
CGGCAGCTCG GCCGCGTCGA CGTGCTCGTC AACAACGCGG GCATCCTGAA GACGGGGCCG
CTCGCCGACG CCACCGACGA CGCGTTCGAC CGGATCTTCG ACATCAACGT GCGCGGCACC
TTCAACACGC TGCGCGAAGC GGCGAAGCGG CTCGCCGACG GCGGCCGGAT CATCAACTTC
TCGAGCACGA CGCTCGCGCT GAAGCTGCCC GGCTACGGGC TCTACAACGC GACGAAGGGC
GCGGTCGAGG CGCTCTCGCA CGTGTTCGCG AAGGAACTGC GCGGACGGCG GGTGAGCGTG
AATGTCGTCG CGCCGGGCCC GGTCGCGACC TCGCTGTTCC TCGAAGGCAA GACCGACGAG
CAGATCCAGG GCTACGCGAA GATGCCGCCG CTCGAGCGCC TCGGCGAGCC GGAGGACATC
GCGGGCGTCG TGTCGTTTCT CGCCGGCCCG GACGGCGGCT GGGTCAACGC GCAGGTGCTG
CGCGCGAACG GCGGGCTCGC TTGA
 
Protein sequence
MNATPLTRVA LVTGASRGIG AAVARRLARD GFSVAVNYAS SGAEADALVA ELRAGGAAAL 
AVRADIGRAD DVRRMFDAVE RQLGRVDVLV NNAGILKTGP LADATDDAFD RIFDINVRGT
FNTLREAAKR LADGGRIINF SSTTLALKLP GYGLYNATKG AVEALSHVFA KELRGRRVSV
NVVAPGPVAT SLFLEGKTDE QIQGYAKMPP LERLGEPEDI AGVVSFLAGP DGGWVNAQVL
RANGGLA