Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA0114 |
Symbol | deoA |
ID | 3087341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | + |
Start bp | 110442 |
End bp | 111764 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637564048 |
Product | thymidine phosphorylase |
Protein accession | YP_104953 |
Protein GI | 53716810 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0213] Thymidine phosphorylase |
TIGRFAM ID | [TIGR02643] thymidine phosphorylase [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.277805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTCC TGCCGCAGGA ATTCATCCGC AAGGTGCGCG ACCGCGCGCC GCTCGACACG GCCGACGTCG CGCGTTTCGT CCAAGGCGTG ACGGCGGGCG ACGTGACCGA AGGCCAGATC GCCGCGTTCG CGATGGCGGT CTATTTCAAC GAGTTGCCGC TGTCCGCGCG CATCGCGCTG ACGCTCGCGC AGCGCGATTC CGGCGACGTG CTCGACTGGC GCGGCGCGCG CCTGAACGGG CCGGTGGTCG ACAAGCACTC GACGGGCGGC GTCGGCGATC TGACCTCGCT CGTGATCGGG CCGATGGTGG CCGCGTGCGG CGGCTACGTG CCGATGATCT CGGGCCGCGG CCTCGGCCAC ACGGGCGGCA CGCTCGACAA GCTCGAGGCG ATTCCCGGTT ACGATGTCGC GCCGTCCGTC GACATGCTGC GCCGCGTCGT GCGCGACGCG GGCCTTGCGA TCGTCGGCCA GACCGCGCAG CTCGCGCCCG CCGACAAGCG GATCTATGCG GTGCGCGACG TGACGGCGAC CGTCGAATCG ATCTCGCTGA TCACCGCGTC GATCCTGTCG AAGAAGCTCG CGGCGGGCGT CGGCGCGCTC GCGATGGACG TGAAGGTCGG CTCCGGCGCG TTCATGCCGA GCGCGGAGCA ATCGGCCGAA CTCGCGCGCA GCATCGTCGA CGTCGGCAAC GGCGCGGGGA TGAGGACGGC CGCGACGCTC ACCGACATGA ACCAGGCGCT CGCGCCATGC GCGGGCAACG CGATCGAGGT GCGCTGCGCG ATCGATTTCC TGACGGGCGC GGCGCGCCCC GCGCGGCTCG AAGCGGTCAG CTTCGCGCTC GCCGCGCAGA TGCTGACGAT GGGCGGGCTT GCCGCGGACG CGCACGATGC GCGCCGCCGG TTGCGCGCGG TGCTCGAATC GGGCGCGGCC GCGGAGCGGT TCGCGCGGAT GGTCGCGGCG CTCGGCGGGC CCGCCGATCT GGTCGAGCGG CCCGAGCGGC ATCTGCCGCG CGCGGCTGCC GCCGCCCCCG TGGCCGCCGC GCGCGCCGGC TGGATCGAGC GGATCGACGC GCGCGCGCTC GGCCTGGCGG TCGTCGGCCT GGGCGGCGGG CGCGCGAAGA TCGGCGACAC GCTCGATTAC TCGGTCGGAC TGTCCGCGCT CGCGGAGCTG GGCGAGCGCG TCGAGGCGGG CCAGCCGCTC GCGACCGTTC ACGCGCGCGA CGCCGATTCG GCCGCGCAGG CGACCGACGC GGTGCGGCGC GCCTACCGGA TCGGCGCGGA GCCGCCGGCG CAGACGCGCG TCGTTCATGC CGTGATCGAA TGA
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Protein sequence | MTFLPQEFIR KVRDRAPLDT ADVARFVQGV TAGDVTEGQI AAFAMAVYFN ELPLSARIAL TLAQRDSGDV LDWRGARLNG PVVDKHSTGG VGDLTSLVIG PMVAACGGYV PMISGRGLGH TGGTLDKLEA IPGYDVAPSV DMLRRVVRDA GLAIVGQTAQ LAPADKRIYA VRDVTATVES ISLITASILS KKLAAGVGAL AMDVKVGSGA FMPSAEQSAE LARSIVDVGN GAGMRTAATL TDMNQALAPC AGNAIEVRCA IDFLTGAARP ARLEAVSFAL AAQMLTMGGL AADAHDARRR LRAVLESGAA AERFARMVAA LGGPADLVER PERHLPRAAA AAPVAAARAG WIERIDARAL GLAVVGLGGG RAKIGDTLDY SVGLSALAEL GERVEAGQPL ATVHARDADS AAQATDAVRR AYRIGAEPPA QTRVVHAVIE
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