Gene BMA3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA3138 
SymbolrpoH 
ID3091146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp3234800 
End bp3235735 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content66% 
IMG OID 
ProductRNA polymerase factor sigma-32 
Protein accessionYP_104622 
Protein GI53724102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAACG CATTGACCCT TCCGAACGCA CTGCGCCCGG CGTCCGCTAA GGCCGTATCG 
GCGGGCTCGC TGACGCTCGC CTCTCATTCG ATGCTGCCCG GCCATCTGGG CAACATCGAC
GCCTATATCC AGGCTGTGAA CCGGATTCCG CTGCTAAGCG CGGAGGAAGA GCGTCAATAC
GCGACCGAAT ACCGCGAGCA AAACAATCTC GACGCCGCGC GCCGGCTCGT GCTGTCGCAC
CTGCGGCTCG TCGTGTCGGT CGCGCGCAAC TACCTCGGCT ACGGCCTGCC GCACGGCGAT
CTGATCCAGG AAGGCAACAT CGGCCTGATG AAGGCGGTCA AGCGGTTCGA TCCCGCCCAG
AACGTGCGCC TCGTGTCGTA CGCGATCCAC TGGATCAAGG CCGAGATTCA CGAGTACATC
CTGCGCAACT GGCGCATGGT CAAGGTGGCG ACGACGAAGG CGCAGCGCAA GCTGTTCTTC
AATCTGCGCA GCCACAAGAA GGGCACGCAG GCGTTCACGC CGGAGGAAAT CGACGGCCTC
GCGCAGGAGC TGAACGTCAA GCGCGAGGAA GTGGCCGAGA TGGAAACCCG CCTGTCGGGC
GGCGACATCG CGCTCGAAGG TCAGATCGAC GACGGCGAGG AATCGTACGC GCCGATCGCC
TATCTCGCCG ATTCGCACAA CGAGCCGACC GCCGTGCTCG CCGCGCGGCA GCGCGACATG
CTGCAGACGG ACGGCATCGC GCGCGCGCTC GAATCGCTCG ACGCGCGCAG CCGCCGGATC
ATCGAGGCGC GCTGGCTGAA CGTCGACGAC GACGGCTCGG GCGGCTCGAC GCTGCACGAT
CTCGCGGCCG AATTCGGCGT GTCGGCGGAG CGCATCCGCC AGATCGAGGC AAGCGCGATG
AAGAAGATGC GCACGGCGCT CGCCGCGTAC GCATAA
 
Protein sequence
MSNALTLPNA LRPASAKAVS AGSLTLASHS MLPGHLGNID AYIQAVNRIP LLSAEEERQY 
ATEYREQNNL DAARRLVLSH LRLVVSVARN YLGYGLPHGD LIQEGNIGLM KAVKRFDPAQ
NVRLVSYAIH WIKAEIHEYI LRNWRMVKVA TTKAQRKLFF NLRSHKKGTQ AFTPEEIDGL
AQELNVKREE VAEMETRLSG GDIALEGQID DGEESYAPIA YLADSHNEPT AVLAARQRDM
LQTDGIARAL ESLDARSRRI IEARWLNVDD DGSGGSTLHD LAAEFGVSAE RIRQIEASAM
KKMRTALAAY A