Gene BMA1850 details

Gene Information

• Locus tag: BMA1850
• ID: 3090264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: +
• Start bp: 1939386
• End bp: 1940021
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637562513
• Product: RNA polymerase factor sigma-70
• Protein accession: YP_103453
• Protein GI: 53725855
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTAGCAT CCGCGAGTTT TACGAATTTT TTCCGATCTT TCACGCCGCA AGAACGCAGC 
GCAGACCTTC ACGGAATGGC ATCAGACAAG GAACTCGCGG ACTTTCTGGC GGGCGTCGAA 
AGGCGCGCGT TCAAGCAGGC TGCATACGCG GTGCGCGACG ACGACGCGTC GCTCGACATC 
GTGCAGGACG CGATGATCCG GCTCGCGGAA AAATACGGCG ACCGCCCGGC CGCCGAATTG 
CCGCTGCTTT TTCAACGGAT CCTTCAGAAC GCGATCCACG ATTATTTCCG CAGACAAAAG 
GTGCGCAACA CCTGGGTCAG CCTGTTCTCG TCGCTGAACA ACACCGACGA CGACGAGTTC 
GACCCGCTCG AGACGCTCGA ATCGGCGGAC GGCGACGGCG TCGAGAGCGG GGAGACGCGG 
CTCGAGCGCG AGCAGGTGCT CGCCCTCATC GACGATGAAA TCCAGAAGCT TCCGGCGCGT 
CAACGGGAAG CCTTCCTGAT GCGTTATTGG GAGGATATGG ATGTCGCCGA GACAGCCGCC 
GCCATGGGGT GCTCCGAAGG CAGCGTCAAG ACGCACTGCT CCCGGGCCAC TCACGCATTG 
GCGTTGGCGC TCAAGGCCAA AGGAATCACG CTATGA 

 

Protein sequence

MLASASFTNF FRSFTPQERS ADLHGMASDK ELADFLAGVE RRAFKQAAYA VRDDDASLDI 
VQDAMIRLAE KYGDRPAAEL PLLFQRILQN AIHDYFRRQK VRNTWVSLFS SLNNTDDDEF 
DPLETLESAD GDGVESGETR LEREQVLALI DDEIQKLPAR QREAFLMRYW EDMDVAETAA 
AMGCSEGSVK THCSRATHAL ALALKAKGIT L