Gene BMA1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1473 
Symbol 
ID3088792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1527640 
End bp1528707 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content70% 
IMG OID637562168 
Productouter membrane porin, putative 
Protein accessionYP_103119 
Protein GI53723674 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.288527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGC TCAGGCTCAG GAGTCCGCAC CGATGCCGCC CGCCCGCGCT CGCCGCCGCC 
GCGACGCTCG CCGCGCTGTC CGGCCCGGCG CACGCGCAGT CGACGCTCAC GCTCTACGGC
GTGGCCGACG CGGGCGTGCA ATATCTGTCG CGCGCCGACG GCCGACACGC CGCCTGGCGA
TTGCAAAACT ACGGAATCCT GCCTTCCCAG CTCGGCATCA AGGGCGAAGA GGATCTCGGC
GGCGGCTGGC GCGCGCGCTT CCAGCTCGAG CAGGGCATCA ACCTGAACGA CAGCACGGCG
ACCGTGCCCG GCTATGCGTT CTTTCGCGGC GCGTACGTCG GCATGGGCGG CCCGGCCGGC
ACCGTCACGC TCGGCCGTCA GTTCAGCACA CTGTTCGACA AGACGCTCTT CTACGATCCG
CTCTGGTACG CGTCGTACAG CGGCCAGGGC GTGCTCGTGC CGCTGTCCGC GAACTTCGTC
GATCACTCGA TCAAGTTCCA GTCGGCGACG TTCGCGGGCT TCGACGTCGA GGCGCTCGCC
GCGATGGCCG GTATCGCGGG TAACACGCGC GCCGGCCGCG TGCTCGAGCT GGGCGGCCAG
TTCACGAGCC GCGGCCTGTC GGCGAGCGCC GTGCTGCATC GCTCGCACGG CACGGCGCAA
GGCGGCGCCG ATCGCTCCGC GCAGCGGCGC GACATCGGCA CGTTCGCCGC GCGTTACGCG
TTCGCCTCGC TGCCGCTCAC CGTCCACGCC GGCGTCCAGC GCCTGACGGG CGAGCTCGAT
CCGGCCCGCA CGATCGTCTG GGGCGGCGCG CGCTATCAGG CAAGCGGACG CTTCGGCTTC
GCGGGCGGCA TTTACCACAC CGATTCGCCG ACGCCGCAGG TCGGCCACCC GACGCTGTTC
ATCGCGAGCA CGACGTGCTC GCTGTCGAAG CGCACCGTCG CGTACCTGAA CCTCGGCTAC
GCGAAGAACA GCGGCCGAAG CGCGCAGACC GTCTACGAGT ATGACCCGAC GCCGCTCGCC
GGCGCATCGC AGTTCGGCGC GATGCTCGGC ATGTATCACG TTTTCTGA
 
Protein sequence
MTTLRLRSPH RCRPPALAAA ATLAALSGPA HAQSTLTLYG VADAGVQYLS RADGRHAAWR 
LQNYGILPSQ LGIKGEEDLG GGWRARFQLE QGINLNDSTA TVPGYAFFRG AYVGMGGPAG
TVTLGRQFST LFDKTLFYDP LWYASYSGQG VLVPLSANFV DHSIKFQSAT FAGFDVEALA
AMAGIAGNTR AGRVLELGGQ FTSRGLSASA VLHRSHGTAQ GGADRSAQRR DIGTFAARYA
FASLPLTVHA GVQRLTGELD PARTIVWGGA RYQASGRFGF AGGIYHTDSP TPQVGHPTLF
IASTTCSLSK RTVAYLNLGY AKNSGRSAQT VYEYDPTPLA GASQFGAMLG MYHVF