| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA1394 |
|---|
| Symbol | |
|---|
| ID | 3089050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | + |
|---|
| Start bp | 1452539 |
|---|
| End bp | 1453435 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637562097 |
|---|
| Product | polysaccharide deacetylase family protein |
|---|
| Protein accession | YP_103050 |
|---|
| Protein GI | 53723629 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTCGCA TCGTCCTCAA GATCGACGTC GACACGTTGC GCGGCACGCG CGAAGGCGTG
CCGAACCTCG CGCGCATCTT CGATCGCTTC GCCGCGCGCG CGACCTTCCT CTTCAGCCTC
GGCCCCGATC ACACCGGCTG GGCGATGCGC CGCGTGCTGC GCCCCGGGTT CCTGAAGAAG
GTGTCGCGCA CGTCGGTCGT CGAACATTAC GGCGTCAGGC AACTGCTGTA CGGCGTGCTG
CTGCCCGGCC CCGACATCGG CCGCCGCGCG CGAGCCGACA TGCGCGCGAT CCACGAAGCC
GGCTTCGAAT GCGGCATCCA CACGTGGGAT CACGTGTACT GGCAGGACAA CGTCCGCCGG
CGCCCGCGCG AGTGGACCGT GCGCGAGATG AACAAGAGCC GCGAGCGCTT CGTCGAGATC
TTCGGCGCGC CGCCCGTCAC GCACGGCGCG GCCGGCTGGC AGATGAACGA CGCGGCGTTC
GAGCAGATCG ACGCGTGGGG GATGCGCTAC GCGTCGGACG GCCGCGGCCA TTCGCCGTAT
CTGCCCGTCG TCGCGGGCAA AACGCTCGCG CACGTGCAGA TGCCGACCAC GCTGCCGACG
CTCGACGAGA TCCTCGGCGT GGACGGCATC GATACGGGCA ACGTCGCCGC GCGTGTGCTC
GAGCATACCG AGCGCAATCC GCACGACCAG GTGTTCACGC TGCACGCGGA GCTCGAAGGC
CAGAAGCTCG CGCCGGTGTT CGAGCAACTG CTCGCGGGCT GGCGCGCGCA AGGCCACACG
TTCGCGACGA TGGGCGACTA TTACGCGACG CTGGACCGCG CCGCGCTGCC ATCGTACCCT
GTCGCGTGGG GCGAAATCCC CGGCCGCTCC GGCGAGCTGA TCGTCCAGCC CGACTGA
|
|---|
| Protein sequence | MARIVLKIDV DTLRGTREGV PNLARIFDRF AARATFLFSL GPDHTGWAMR RVLRPGFLKK
VSRTSVVEHY GVRQLLYGVL LPGPDIGRRA RADMRAIHEA GFECGIHTWD HVYWQDNVRR
RPREWTVREM NKSRERFVEI FGAPPVTHGA AGWQMNDAAF EQIDAWGMRY ASDGRGHSPY
LPVVAGKTLA HVQMPTTLPT LDEILGVDGI DTGNVAARVL EHTERNPHDQ VFTLHAELEG
QKLAPVFEQL LAGWRAQGHT FATMGDYYAT LDRAALPSYP VAWGEIPGRS GELIVQPD
|
|---|
| |