Gene BMA1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1227 
Symbol 
ID3090127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand+ 
Start bp1288473 
End bp1289492 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID637561949 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_102906 
Protein GI53723486 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCTT CGCCTGCCCT CAGTCCACGC CGGGTCTCCG TCGCCCCGAT GATGGACTGG 
ACCGATCGCC ACTGCCGTTC GTTTCATCGG ACGATCTCGC GCCATGCATG GCTCTACACC 
GAAATGGTGA CGACGGGCGC GCTGATCCAC GGCGATGTCG CGCGCCATCT CGCGTTCACG 
CCCGACGAAG CCCCCGTTGC GTTGCAACTG GGCGGCAGCG AACCCGCCGA TCTCGCGCAC 
TCCGCGAAAC TCGGCGAGCG CTGGGGCTAC GACGAAATCA ACCTGAATTG CGGCTGCCCG 
TCCGAGCGCG TGCAGCGCGG CGCATTCGGC GCGTGCCTGA TGAACGAGCC GCAACTCGTC 
GCGGACTGCG TGAAGGCGAT GCGCGACGCG GTGTCGATCC CGGTGACGGT CAAGCACCGG 
ATCGGCGTCG ACGCGGTCGA AGACTACGCG TTCGTGCGCG ACTTCGTCGG CACGGTCGCC 
GCGGCCGGCT GCGACGTGTT CGTCGTGCAC GCGCGCAACG CGATCCTGAA GGGGCTGTCG 
CCGAAGGAAA ACCGCGAGAT TCCGCCGCTC AAGTACGACT ACGCGTATCG GCTCAAGCGC 
GACTTTCCGC AGATCGAAAT CGTCATCAAC GGCGGCGTCA CGACGCTCGA CGAAGTCGAG 
CAGCATCTGC GACATGTCGA CGGCGTGATG CTCGGCCGCG AGGCATATCA CAACCCGTAC 
GTGCTCGCCG GCATCGACGC ACGCTTCTAC GGCGCGAGCG CGCCGGCGCC GACGCGCGAA 
GAGGTGGAGG CGAAGCTCGT CGAATACTGC GCGGCCGAGC TCGCGCGCGG CACGTATCTC 
GGGGCGATCG TGCGGCATGC GCTCGGCCTG TATCGAGGCG TCGCGGGCGC GCGCGGCTGG 
CGTCGCGTGC TGTCAGACAA CAAGCGGCTC GGGCGCGGCG ACCTATCGAT CTTCGACGAG 
GCGCGCACGC ACCTGCCCCG TCCGGAAGAA TTTTTTGAAA AAAAGGCTTT GCAAAGTTAA
 
Protein sequence
MSASPALSPR RVSVAPMMDW TDRHCRSFHR TISRHAWLYT EMVTTGALIH GDVARHLAFT 
PDEAPVALQL GGSEPADLAH SAKLGERWGY DEINLNCGCP SERVQRGAFG ACLMNEPQLV 
ADCVKAMRDA VSIPVTVKHR IGVDAVEDYA FVRDFVGTVA AAGCDVFVVH ARNAILKGLS 
PKENREIPPL KYDYAYRLKR DFPQIEIVIN GGVTTLDEVE QHLRHVDGVM LGREAYHNPY 
VLAGIDARFY GASAPAPTRE EVEAKLVEYC AAELARGTYL GAIVRHALGL YRGVAGARGW 
RRVLSDNKRL GRGDLSIFDE ARTHLPRPEE FFEKKALQS