| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA1056 |
|---|
| Symbol | |
|---|
| ID | 3090875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | + |
|---|
| Start bp | 1103317 |
|---|
| End bp | 1104813 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637561796 |
|---|
| Product | RND efflux system outer membrane lipoprotein |
|---|
| Protein accession | YP_102755 |
|---|
| Protein GI | 53724830 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.14613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT TCCCGTTGTC CGCTTGCCGG ACCGCCGTGG CCGTCGCGGT CGCCGCGCTC
GCGCTCGCGG GATGCGCGAA CTATTTCGGC CTCAAGAACG ACAAGGCGAT CGCTCCCGCG
GCGCAGTTCG AAAGCGCGCG GAGCCTGCCC GCGCAGGGCG GCCAATGGCC GTCGCTCGAC
TGGGCGAACC AGTTCGGCGA TCCGCAATTG CCGAAGCTGA TCGACGAGGC GCTCGAAGGC
AATCCGACGA TCGCGCAGGC GCAGGCGCGC ATCGCGAAGG CGTCGTCGTA CATCGAGTCG
TCGCGCTCGA CGCTGCTGCC GAAGGCCGAC GCGAAGTACT CGTGGACCCG CGAGCTGTAC
TCGGGCAACG CTCTTTTCCC GCCCCCGTAC GGCGGCCAGT GGTACAGCGA GAACAACGCG
CTCGCGAGCG CGTCGTGGGA GCTCGATCTG TGGGGCAAGA ACCGCGCGCG CCTGAATGCG
GCCGTGTCGC AGGAAAAGGC CGCCGAAGCC GACTTGCAGC AGGCGCGCGT GACGCTCGCG
ACGTCGGTCG CGCGCACGTA CAACCAGCTC GCGCAACTGT ACGCGCTGCG CGACATCGCC
GGGCGCGAGA TCTCGAACCG GCAGACGGTC GACAAGATCA CCGACGGCCG CGTCGGCGCG
GGCCTCGACA CGAACGTCGA GCGCCAGACC GCGCGCGGCA ACATCGCGAC GAGCCAGTCG
ACGCTGTCCG ATCTCGACGG CCAGATCACG AACGTCCGCT ATCAGCTCGC CGCGCTGCTC
GGCAAAGGTC CGGACCGCGG GCTGCAGATC GCCGCGCCCG TGCTGAGCGC GGGCGGCGCG
GTCGCGCTGC CGGAGAACCT GCCCGCCGAT CTCGTGTCGC GCCGCCCGGA TCTCGTCGCC
GCGCGCTGGC AGGTCGAAGC GGCGATGCAC GACGTGAAGG AAGCGAAAGC CGAGTTCTTT
CCGGACATCA ACCTCGCGGC GGGCTTCGGC TTCGACGCGT TCGGCTGGGG CCGATTCCTG
AACTTCGCGA GCCGCCAGGC GCAGTTCGGC CCCGCGATCC ACCTGCCGAT CTTCGACGGC
GGCGCGCTGC GCGCGCAATT GAAGGGCCGC TACGCGGACT TCGATCTGTC GGTCGCGAAC
TACAACCAGA CGCTCATCAA CGCGCTGAAC GACGTCGCGA CGCAAGTCGC GTCGATTCGC
TCGGTCGACA CGCAAATGGG CGACGCGCAG CGCGCGCTCG ATGCGTCGAC GCGCGCCTAC
GAGCTCGCGG TGATCCGCTA CAAGGCGGGC CTGTCGCCGC AGTTGCAGGT GCTCAACGCG
GACAGCAACC GGCTCGCCGC CGAGCAGACG GTGACGAACC TGAAGATGCG CCGCCGCGAC
CTGCAGATCG GCCTCGTGAA GGCGCTCGGC GGCGGCTTCG ACGCGGCCGG CACGCGGCTC
GCCGCGCCCG CCCCCGCCTC GGCGCCGGCC GCGCCCGCGC AGCACGCATC GAACTGA
|
|---|
| Protein sequence | MKTFPLSACR TAVAVAVAAL ALAGCANYFG LKNDKAIAPA AQFESARSLP AQGGQWPSLD
WANQFGDPQL PKLIDEALEG NPTIAQAQAR IAKASSYIES SRSTLLPKAD AKYSWTRELY
SGNALFPPPY GGQWYSENNA LASASWELDL WGKNRARLNA AVSQEKAAEA DLQQARVTLA
TSVARTYNQL AQLYALRDIA GREISNRQTV DKITDGRVGA GLDTNVERQT ARGNIATSQS
TLSDLDGQIT NVRYQLAALL GKGPDRGLQI AAPVLSAGGA VALPENLPAD LVSRRPDLVA
ARWQVEAAMH DVKEAKAEFF PDINLAAGFG FDAFGWGRFL NFASRQAQFG PAIHLPIFDG
GALRAQLKGR YADFDLSVAN YNQTLINALN DVATQVASIR SVDTQMGDAQ RALDASTRAY
ELAVIRYKAG LSPQLQVLNA DSNRLAAEQT VTNLKMRRRD LQIGLVKALG GGFDAAGTRL
AAPAPASAPA APAQHASN
|
|---|
| |