Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A2017 |
Symbol | |
ID | 4890018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 1949797 |
End bp | 1951302 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640148281 |
Product | hypothetical protein |
Protein accession | YP_001079193 |
Protein GI | 126447820 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCAGC TTGAATCGTC TGCCGAGAAG GTGGTCGTCG ATCAGAACAA CGTCAACGAG GATCTGAAGG ACATCCTGCG CCGCTCGTTC CGGCCGCGCA CCAACGAGGC GGCCGAGGCG GTGCAGAACG CGGTCGAGAC GCTGCTCACG TATGCGCGGC GCAGCCGGGT CGTGGTTCGT GAGGATGTCG CGCAGACGAT CGAGCAGCTG GTTGCCGAGC TCGACAAGAA GATCTCCGAG CAACTGACGC TCGTGCTGCA CAACAAGCGC TTTCAGAGCC TCGAAGGCGC GTGGCGCGGA TTGCACTACC TCGTGTCGAA CACCGATACG AGCGAGAACC TGAAGATCCG CTACCTGAAC ATCTCGAAAG CGGATCTCGG CAAGACGCTG CGGCGCTTCA AGGGCGTCGT GTGGGATCAG AGTCCGATTT TCAAGATGAT CTACGAGCAG GAGTACGGCC AGTTCGGCGG CGAGCCGTTC GGCTGCCTGA TCGGCGACTT CTATTTCGAC CACAGCATGC AGGACGTGTC GATCCTCACC GAGATGTCGA AGATCTCGGC GGCCGCTCAC GCGCCGTTCA TCGCGGCTGC CGCGCCCGGC CTGCTGCAGA TGGACGACTG GAGCGAGCTG TCGAACCCGC GCGACGTGTC GAAGATCTTC ACGGCGACCG AGTATGCGTT CTGGCGGCGC CTGCGCGAGA GCAACGACTC GCGCTACCTC GCGCTCACGC TGCCGCGCTT CCTCGCGCGT GTGCCGTATG GTCCGAAGAC GCAGCCCGTC GAAGAGTTCG GCTTCGAGGA GAAGGTCGAT CCGAACCGCG CGGAGGATTT CTGCTGGGCG AACTCCGCGT ATGCGATGGG CGCGAACATC ACGCGCGCGT TCAAGACCTA CGGCTGGTGC ACGAAGATTC GCGGCGTCGA GTCGGGCGGC GCGGTCGAGG TGCTGCCGAA GTTCGTGCTG CCGTCGCAGG ATCGCGAAGT CGATCTGCAT TGCCCGACCG AGATCGCGAT CTCGGACCGC CGCGAGCACG AATTGTCCGA GTCGGGCCTG ATGCCGCTCG TGTATCGGAA GAATTCGGAT ACGGCCGCGT TCATCGGCGC GAAGACCGTG CATCGTCCGG CGATCTACGA GGACGACGAC GCGACCGCGA ACTCGAACCT GTCGTCGCGG CTGCCGTACA TCTTCGCGAC CTGCCGTTTC GCGCATTACC TGAAGTGCAT CGTGCGCGAC AAGATCGGTT CGTTCAAGTC GGCCGAGGAC ACGCAGCGCT GGCTCAACGA CTGGCTGATG AACTACGTGG ACGGCGACCC GAGCATCTCG AGCGAGGTGA CGAAGTCGCA GCGTCCGCTG TCGGCGGCGG AGGTGGTCGT CGACGAGATT CCGGAAAACC CCGGCTACTA TCGCGCGCAG TTCTTCCTGC GCCCCCATTT CCAACTGGAG GGTTTGACCG TTTCTCTCCG GCTGGTTTCG AAGCTTCCGT CGACCAAGCA CGAGGTGACG ACCTGA
|
Protein sequence | MQQLESSAEK VVVDQNNVNE DLKDILRRSF RPRTNEAAEA VQNAVETLLT YARRSRVVVR EDVAQTIEQL VAELDKKISE QLTLVLHNKR FQSLEGAWRG LHYLVSNTDT SENLKIRYLN ISKADLGKTL RRFKGVVWDQ SPIFKMIYEQ EYGQFGGEPF GCLIGDFYFD HSMQDVSILT EMSKISAAAH APFIAAAAPG LLQMDDWSEL SNPRDVSKIF TATEYAFWRR LRESNDSRYL ALTLPRFLAR VPYGPKTQPV EEFGFEEKVD PNRAEDFCWA NSAYAMGANI TRAFKTYGWC TKIRGVESGG AVEVLPKFVL PSQDREVDLH CPTEIAISDR REHELSESGL MPLVYRKNSD TAAFIGAKTV HRPAIYEDDD ATANSNLSSR LPYIFATCRF AHYLKCIVRD KIGSFKSAED TQRWLNDWLM NYVDGDPSIS SEVTKSQRPL SAAEVVVDEI PENPGYYRAQ FFLRPHFQLE GLTVSLRLVS KLPSTKHEVT T
|
| |