Gene BMA10247_A0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A0658 
Symbol 
ID4889906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand
Start bp607945 
End bp609717 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content72% 
IMG OID640146934 
Producttype IVB pilus formation outer membrane protein 
Protein accessionYP_001077859 
Protein GI126447055 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID[TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTGC TGTTCGCCAT TTCATTACTG GCCGTCGCAT GGCTCGCCGG CTGCACCGGC 
CTTCGCGGCG GCATCGAGCG CGACGCGCGG CGCGATTCGA ACGAAACCGG CGCGCTGCTC
AAGCGCGCAT CCGACGGCGA CAACAGCGTG CGCTCGCTCG CGCCCGTCGT CGTCGACAAC
GGGCTGTGGG TGTCCGCGGG CACCGTCAAG CTGCGCAACA GCGAGCAGTT GCCGCCGCTG
TTCGACGAGC CGGCGTCGTT CGATCGCTCG GTCGCTTCGT TGTCCGAATT CGCCGAGCAG
ATCACGCGCC TGACCCAGGT GCCGACGCAG GTCGCCGCGA GCGCGCAGCA GGCGGCCGCG
CGTTCGCAGC ACGGCGGCGC GGGCGACGCC GCGCGCGGCG CGCCGGCCTT TCTCGACGCA
TCGGGCGCGC GCGCGGTGCC GCCGCTGCCC CCCGGCCTGC CGGGCGGCGC ATCGGCGGGC
GGCGGCAAGA CGGGCGGCGG CGCGGCGGGC GCGGGCTCGG AGGGCGGCGG CGGCACGTCG
TTCGCGCCGG TGCGCGTGCT GTACGCGGGC GGCACGCTGC GCGGCCTGCT CGACGCGGCC
TGCGCGCGCT TCGGCGTGTC CTGGAAGTAC GAGCAGGGGG CGATCCGCTT CTTCTTCACC
GATACCCGCA CGTTCCAGGT CAACGCGATT CCGGGCGACT CGTCGCTGAA CGCATCGGTC
GTGAGCGGCG CGACGAGCGA CGGCGCCGCG GGCGGCTCGC AGTCGGGCGG CTCGGGGGGC
TCGGGCGGCG GCATCAACGG CGCGGGCTCC GGCACGACGG GCCTCACCGC GAACAACACG
GCGAACACCG CGGTGAACTC GCAGCTGTCG GTGTTCAACG GCCTGCAAAG CGCGATCCAA
TCGATGCTCT CGCGCTACGG CAGCTCGGTC GCCTCGCCCG CGACGGGATC GATCTCGGTG
ACCGACACGC CCGACGTGCT CGAGCGCGTC GCCGCGTTCA TGGCGCAGCA GAACCGCTCG
CTGTCGCGGC AGGTGCTGCT CAACGTGACC GTGCTCAGCG TGTCGCTGCA GGCGGGCGAC
GCGTACGGGA TCGACTGGAA CCTCGTCTAC AAGACGATGT CCGCGGGGTT CGGCATCACC
AATCCGTTCC ATCCGACGGC GCTGACGGCG CCCGCCGACA TGTCCGCGGC GGTGCTCAGC
CCGACGAGCC GCTTCAACGG CACGAAGCTG CTGATCCGCG CGCTGTCGCA GCAGGGGACG
GTGCGGCGCA AGACGTCGGC GTCGGTCACG ACGCTCAACA ACCAGCCGGT GCCCGTGCAG
GTCGCGACGC AGACGGGCTA CCTCGCGTCG GTGTCGACGA CGAACACCGC GAACGTCGGC
TCGTCGACGG CGCTCACGCC GGGCGTCGTG ACGACGGGCT TCAACATGAC GCTGCTGCCG
CACGTGCTCG ACGACGGCAC CGTGATGCTG CAGTTCTCGA CCAACATCTC GTCGCTGCTC
GAGCTGAAGG AGGTGACGAG CAGCACCGGC GGCAGCGGCC TGGCGCGCAT CCAGACGCCC
GACGTCGACA TGCGCAACTT CCTGCAGCGC GTCGCGATGA AATCGGGCGA GACGCTCGTC
ATCAGCGGCT ACGAAGGCGC GAACGATTCG CTCGACGAGC GCGGCGTGGG CACGCCGAAG
ATGATCGCGC TCGGCGGCGG CTACGAGGCG CAGCGCGCGC GCGAGGTGAT CGTGATCCTG
ATCACGCCCG TCACGCAGCG CGGCGGCGCC TGA
 
Protein sequence
MRVLFAISLL AVAWLAGCTG LRGGIERDAR RDSNETGALL KRASDGDNSV RSLAPVVVDN 
GLWVSAGTVK LRNSEQLPPL FDEPASFDRS VASLSEFAEQ ITRLTQVPTQ VAASAQQAAA
RSQHGGAGDA ARGAPAFLDA SGARAVPPLP PGLPGGASAG GGKTGGGAAG AGSEGGGGTS
FAPVRVLYAG GTLRGLLDAA CARFGVSWKY EQGAIRFFFT DTRTFQVNAI PGDSSLNASV
VSGATSDGAA GGSQSGGSGG SGGGINGAGS GTTGLTANNT ANTAVNSQLS VFNGLQSAIQ
SMLSRYGSSV ASPATGSISV TDTPDVLERV AAFMAQQNRS LSRQVLLNVT VLSVSLQAGD
AYGIDWNLVY KTMSAGFGIT NPFHPTALTA PADMSAAVLS PTSRFNGTKL LIRALSQQGT
VRRKTSASVT TLNNQPVPVQ VATQTGYLAS VSTTNTANVG SSTALTPGVV TTGFNMTLLP
HVLDDGTVML QFSTNISSLL ELKEVTSSTG GSGLARIQTP DVDMRNFLQR VAMKSGETLV
ISGYEGANDS LDERGVGTPK MIALGGGYEA QRAREVIVIL ITPVTQRGGA