| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0389 |
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| Symbol | oppF |
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| ID | 4889438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009079 |
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| Strand | + |
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| Start bp | 344931 |
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| End bp | 346064 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640146667 |
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| Product | oligopeptide ABC transporter, ATP-binding protein OppF |
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| Protein accession | YP_001077592 |
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| Protein GI | 126447243 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG CGACCGATCT CATTTCTTCC ACTTCGTCGT TCGTATCGGC ATCGGCGGGC
GCGCCGGGCG GCGGCGAGGC CTCCGGCGCC GATGCGCCCG GCGCCGACGC GCGCGGTGGC
GGCGCATCGC CGCATGCCGA CGCGCTGCTG TCGGTGCGCG ATCTCAAGGT GCATTTCCGC
GTGCCGCTCG GCGGCTATCC GTGGTCGCCC AAGGGCACGC TGCGCGCGGT CGACGGCGTG
TCGTTCGACG TGAAGCGCGG CGAGACCGTC GGGCTCGTCG GCGAATCGGG CTGCGGCAAG
TCGACGCTCG CTCGCGCGCT GATCGGCCTC GCGCCGGTGA CGGCGGGCAC CGTGCAGTGG
CGCGGTGTGC CGATCGTGAG CAGCGCGCGG CGCGACGCGC GCAGGATCCG CCGCGAAATG
CAGATGATCT TTCAGGATCC GCTCGCGTCG CTTGATCCGC GCATGACGAT CGAGCAGGTC
GTCGCGGAGC CGCTCGTCAC GCACCAGCCG GGCATCGGCC GCGACGAAGT GCGCCGCCGC
GTGCTGACGA TGCTCGAGCG CGTCGGCCTG AGCGCCCACC ACCTGCTTCG TTATCCGCAC
GAATTTTCCG GCGGGCAGTG CCAGCGCGTC GGCATCGCGC GCGCGTTGAT CGGTGAGCCG
CATCTCGTGA TCTGCGATGA GCCCGTGTCC GCGCTCGACG TGTCGATTCA GGCGCAGATC
GTCAATCTGC TGCGCGACCT GCAACGCGAG CTTTCGCTGT CCTATCTGTT CGTCGCGCAC
GATCTCGCGG TCGTCAAGGC GATCAGCCAG CGCGTGCTCG TGATGTATCT CGGCCGCGTG
ATGGAGTTCG GCACGCGCCG CGAAGTGTAC GGCGCGCCGC AGCACCCGTA CACGCGCGCG
TTGCTCGCCG CCGCGCCGAC GCCGGAGCCC GCGCGCGAGC GCGCGCGCCG GCCGCTGTTG
CTCGCGAGCG AAATGCCTTC ACCGCTCGAT CCGCCGTCGG GGGGCGCGTT TCGCACGCGC
TGCCCGGACG CGATCGACGC GTGCGCGCGC GAGGTGCCGC AGCCCGAAGT GCGCGGCGTG
ACGGGCGCGC GCGTCGCGTG CATTCGCGCG GGCACGGGCG GTGCGGCGCG CTGA
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| Protein sequence | MSAATDLISS TSSFVSASAG APGGGEASGA DAPGADARGG GASPHADALL SVRDLKVHFR
VPLGGYPWSP KGTLRAVDGV SFDVKRGETV GLVGESGCGK STLARALIGL APVTAGTVQW
RGVPIVSSAR RDARRIRREM QMIFQDPLAS LDPRMTIEQV VAEPLVTHQP GIGRDEVRRR
VLTMLERVGL SAHHLLRYPH EFSGGQCQRV GIARALIGEP HLVICDEPVS ALDVSIQAQI
VNLLRDLQRE LSLSYLFVAH DLAVVKAISQ RVLVMYLGRV MEFGTRREVY GAPQHPYTRA
LLAAAPTPEP ARERARRPLL LASEMPSPLD PPSGGAFRTR CPDAIDACAR EVPQPEVRGV
TGARVACIRA GTGGAAR
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