| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_3029 |
|---|
| Symbol | |
|---|
| ID | 4891543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 2993304 |
|---|
| End bp | 2994944 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640151677 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001082549 |
|---|
| Protein GI | 126451248 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGT CGACCCACGA GGTGAGCAAC CAGTTCGACG AACTGACCGA CTATAACCTC
TTCGCCACCG ACCCGGCGCT CGGCGAAGCG CTCGAACGCG CGGGCGCGTC GTGGGCCGCG
CCGCGGCTCG ACGCGTTCGG CGCGCGGCTC GGCACGCGCG ACATCGCGCG GCTGGCCGAG
GACGCGAACC GTCACGTGCC CGAGCTGAAT GCGTTCGACC GCCGCGGCCG CCGCATCGAC
CGCGTGGACT TCCACCCGAG CTGGCACGCG CTCCTCGGTC TGTATCGCGA ACAGGGCCTG
ATCTCGCTCG CGTTCCGCGA ATCGCGCGCC GGCCGCTGGG CGGCGAACGC GGCGGGCTTC
TACCTGCACG GCCAGATCGA GGCGGGCACG CTGTGCCCGG CAACGATGAC GCAGGCGAGC
ATTCCCGTTC TGCAGAAGGA GCCCGCGCTG TGGGCGCAAT TGAAAGACAA GCTCTACAGC
GACACCCACG ATCCGCGCGA CGCGCCGATC GGCGCGAAGC AGTCGATCAT GATCGGCATG
GGCATGACCG AAAAGCAGGG CGGCTCGGAC GTGCGCGCGA ACACGACGCT CGCCGTGCCC
GTCGGCGCGG GCGGCCGCGG CGGCGAGCAT CTGCTGCGCG GCCACAAATG GTTCTTCTCC
GCGCCGATGT GCGACGCGCA TCTCGTCGTC GCGCGCACCG AAGCGGGCGG CCCGTCGTGC
TTCTACGTGC CGCGCTGGCG GCCGGACGGC ACGAAGAACG CGGTGCGCAT CCAGCGGCTG
AAAAACAAGG TCGGCAACCG CAGCAATTCG AGCAGCGAAA TCGAACTCGA CGACGCATGG
GGCGTGATGC TCGGCGAAGA AGGCCGCGGC ATTCCGACGA TCATCGAGAT GGCCGCCTAC
ACGCGCCTGA ACTGCGTGCT CGGCAGCGCG GCGATCCTGC GCCAGGGGCT CGTTCAGGCG
ATCGCGTACA CGCGGCAGCG TCACGCGTTC GGCCGCGCGC TCGCCGAGCA GCCGCTGATG
CGCGCGGTGC TCGCCGATCT CGCGCTCGAA AGCGAAGCGG CGCTCGCGCT CGCGATGCGG
CTCGCGCAGG CGTTCGAGCG CGGCGAGCCG GCGTGGACGC GCATCGTCGC GCCGGCCGCG
AAATTCTGGG TCTGCAAGCG CGCGGTCGAG GCGGCGGGCG AAGTAATGGA GATATTCGGC
GGCAACGGCT ACGTCGACGA CGGTCCGATC GCGCGGCTGT TTCGCGAGGC GCCCGTCAAT
TCGATCTGGG AAGGCTCCGG CAACGTGATG TGTCTCGACG TGATGCGCGC GATCTCACGC
GAGCCGGACG CGGCACACGC GCTCATCGAC GAGTTGCACG CGCTCGGCGG CCGCGATGCG
CGGATCCGCG CGGAACTCGA CGCGCTGCGC GCGCAGCTCG GCACGCCGCC CGATGCGCTC
GAAGCGCTCG GCCGCGTGCT CGCGCAGCGC ATCGCGCTGC TCGCGCAGGC ATGCCTGCTG
AGCGACGCGG CGCCCGCCGT CGTGAGCGAC GGCTTCATCG CGACGCGCTT CGGCGAGCCC
GCGTGGGGCC GCGTGACGGG CGCGCTCGAT GCGCGGCGCG TCGACGCCGC CGCACTGCTG
CAGCGCGCGT ACGCCGCGTA G
|
|---|
| Protein sequence | MAWSTHEVSN QFDELTDYNL FATDPALGEA LERAGASWAA PRLDAFGARL GTRDIARLAE
DANRHVPELN AFDRRGRRID RVDFHPSWHA LLGLYREQGL ISLAFRESRA GRWAANAAGF
YLHGQIEAGT LCPATMTQAS IPVLQKEPAL WAQLKDKLYS DTHDPRDAPI GAKQSIMIGM
GMTEKQGGSD VRANTTLAVP VGAGGRGGEH LLRGHKWFFS APMCDAHLVV ARTEAGGPSC
FYVPRWRPDG TKNAVRIQRL KNKVGNRSNS SSEIELDDAW GVMLGEEGRG IPTIIEMAAY
TRLNCVLGSA AILRQGLVQA IAYTRQRHAF GRALAEQPLM RAVLADLALE SEAALALAMR
LAQAFERGEP AWTRIVAPAA KFWVCKRAVE AAGEVMEIFG GNGYVDDGPI ARLFREAPVN
SIWEGSGNVM CLDVMRAISR EPDAAHALID ELHALGGRDA RIRAELDALR AQLGTPPDAL
EALGRVLAQR IALLAQACLL SDAAPAVVSD GFIATRFGEP AWGRVTGALD ARRVDAAALL
QRAYAA
|
|---|
| |