Gene BMA10229_A1360 details

Gene Information

• Locus tag: BMA10229_A1360
• Symbol: cpdB
• ID: 4790709
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10229
• Kingdom: Bacteria
• Replicon accession: NC_008836
• Strand: -
• Start bp: 1388454
• End bp: 1390502
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 67%
• Product: 2`,3`-cyclic-nucleotide 2`-phosphodiesterase
• Protein accession: YP_001027343
• Protein GI: 124385321

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.294655
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGTTTTC GCCGGCGGCG CCTTGCCGCC GCCCTCGTCG CGTGCGCGGC GCTCGTCGCG 
GGCTGCAACG ACGACGTCGA TTCGCCCGGC GCGCAGTCCG GCGCGAGCGC GCCCGCCGGC 
ACGAAGGCGA CGCTCGCCGT GCTCGAGACG ACCGATCTGC ACACGAACGT GCTGTCGTAC 
GACTACTTCA AGCTCGCGGC CGACAAGTCG CTCGGCTTCG AGCGGGTCGC GACGCTGATC 
GCGCAGGCGC GCGCGCAATA TCCGAACACG CTGCTGCTCG ATAACGGCGA CACGATCCAG 
GGCACGGCGC TCGCCGACTA TCAGGCGCTC GTGAAGCCCG TGTCGTGCGG CGAGACGCTT 
GCGATCTACA AGGTGATGAA CGCGGCGAAG TTCGACGGCG GCGGCATCGG CAATCACGAA 
TTCAACTACG GGCTGCCGTA CCTGTCGCAG GTGACGGGCA ACGCGTTCGC CGTCGACGGC 
CTGCCCGATC CGGCCCGGCA GAAGAAATGC GCGGGGCCGG ACTTCCCGCA GGTGCTCGCG 
AACGTGATCA GCGCGAAGAC GAACGCGCCC CTCTTCACGC CGTACACGAT CCTCACGAAG 
AACGTCACCG CGACGACGCC CGACGGCCGC ACGGTCACGG CGCCCGTGAA GGTCGGCATC 
ATCGGCTTCA CGCCGCCCGC GATCATGAAC TGGGACAAGC GCTGGCTCGA CGGCAAGGTC 
TATACGACGG GCCTGAAGGA AGCCGCCGAG AAGTACATTC CCGAGATGCG CGCGAAGGGC 
GCGGACCTCG TCGTCGCGAT CTCGCACGGC GGGCTCGACA ACTCGCCGTA CTCGCCGACG 
ATGGAAAACG GCAGCTGGTG GCTGTCCACC GTGCCCGGCA TCGACACGAT GCTGATCGGC 
CACTCGCACC AGGTGTTCCC CGACGCGACG AGCACCGTCG CGCAGTTCAA CCTGCCGGGC 
GTCGACAAGG TCAAGGGCAC GGTCAACGGC GTGCCGACCG TGATGGCGAA CTACTGGGGC 
AAGCACCTCG GCGTGATCAA GCTCGGCCTC GCGTTCGACG GCAAGACGTG GCGCGTCGAC 
AAATCGCAGA CCACCGTCGA GGCGCGCTCG ATCCAGAACC CGGACAAGAG CTACGTCGAC 
GCCGATCCGT CGGTGGCCGC GGCGATCGCG GCCGAGCACC AGGCGACGAT CGACTACGTG 
AAGACGCCGA TCGGCAGCAC CGACTACCGG ATGACCAGCT ACTTCGCGGA CGTGGGCGAT 
CCGGGCGCGA TCCAGCTCGT CAACGAGGCG CAGGCCGACT ACGTCGCGAA CTACGTGCAG 
ACGAACCTGC CGCAGTATGC GTCGCTGCCG GTGCTGTCGG TGAGCGCGCC GTTCAAGAGC 
GGCTTCGGCG GCGGCACCGA TTTCACCGAC GTCGCGGCGG GCGCGCTCGC GATCAACAAC 
GCGGCCGATC TCTACCTGTA TCCGAACACG GTCTACGCGG TGAAGGTGAG CGGCGCGGAC 
ATCAAGAACT GGCTCGAGAC CGCGGCGAAG CGCTTCAACA CGATCGACCC GACGAAAGCG 
ACCGTGCAGA AGCTCGTGAG CACGTTCCCC GGCTACAACT TCGACATGTT CACGTCCGCC 
GATCTGCGCT ACGAGATCGA CGTCACGCAG CCGGTGGGCA GCCGGATCCG CAACCTCGCG 
TACAAGGGCG CGCCGATCGA TCCGAATGCG CAGTTCATCG TCGCGACGAA CAACTACCGC 
GCGAGCGGCG GCGGCAACTT CCCCGGCCTG GACGGCAGCA AGACGATCTT CGCGTCGCCC 
GACGCGAACC GCGACGTGCT GATCGCATAC ATCAAGAAGC GCGGCCGGAT CACGCGCGCG 
GCGGACGGCA TGCAGCGCAG TTGGCGCTTC ACGAAGCTCG CGGGCTCGGT CGCGCACGTG 
CAGTTCGCGT CGGCGCCGAA CCTCGCGGCG CTCGCGAGCA CCGCGGGCCT CGCGGGCATC 
ACGCAAGTCG CGGCCGACGA CGGCTCCGGC AAGGGACTCG CGACTTACGA GATCGATCTG 
ACGCAATGA 

 

Protein sequence

MRFRRRRLAA ALVACAALVA GCNDDVDSPG AQSGASAPAG TKATLAVLET TDLHTNVLSY 
DYFKLAADKS LGFERVATLI AQARAQYPNT LLLDNGDTIQ GTALADYQAL VKPVSCGETL 
AIYKVMNAAK FDGGGIGNHE FNYGLPYLSQ VTGNAFAVDG LPDPARQKKC AGPDFPQVLA 
NVISAKTNAP LFTPYTILTK NVTATTPDGR TVTAPVKVGI IGFTPPAIMN WDKRWLDGKV 
YTTGLKEAAE KYIPEMRAKG ADLVVAISHG GLDNSPYSPT MENGSWWLST VPGIDTMLIG 
HSHQVFPDAT STVAQFNLPG VDKVKGTVNG VPTVMANYWG KHLGVIKLGL AFDGKTWRVD 
KSQTTVEARS IQNPDKSYVD ADPSVAAAIA AEHQATIDYV KTPIGSTDYR MTSYFADVGD 
PGAIQLVNEA QADYVANYVQ TNLPQYASLP VLSVSAPFKS GFGGGTDFTD VAAGALAINN 
AADLYLYPNT VYAVKVSGAD IKNWLETAAK RFNTIDPTKA TVQKLVSTFP GYNFDMFTSA 
DLRYEIDVTQ PVGSRIRNLA YKGAPIDPNA QFIVATNNYR ASGGGNFPGL DGSKTIFASP 
DANRDVLIAY IKKRGRITRA ADGMQRSWRF TKLAGSVAHV QFASAPNLAA LASTAGLAGI 
TQVAADDGSG KGLATYEIDL TQ