Gene BMA10229_A0127 details

Gene Information

• Locus tag: BMA10229_A0127
• ID: 4792382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10229
• Kingdom: Bacteria
• Replicon accession: NC_008836
• Strand: -
• Start bp: 130221
• End bp: 130898
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 71%
• Product: hfq protein
• Protein accession: YP_001026135
• Protein GI: 124385350

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000000116408
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAATC CTGCAGAATC CCATCCGCAA AACGACTTCA TCAATGCCGC GCGCAAGGAA 
CGCAAGCGCG TCGAAATTTA TCTCGTCAAC GGTATTCGAC TGACGGGTTG CATCGAGTCG 
TTCGACCAGT ATCTGGTGAT GCTGCGCACG CCCGTCGGCC TGCAAGGCAT CTATAAACGC 
GCCATCTCGA CGATCCAGCT CGACACGGGC GGCTCCCGTC CGGGCGGACG CGGCCCGCGC 
GCGGGCGGCG CCCACGGCGG CGGCGGACGC CCCGGCGGAC GCGAAGGCGG CGGTCATGGC 
CCGTACGGCT CGCACGGCGG CTCGCGCGAA CCCCGCGGCG ACGGCGGCGG CTATGGCGCT 
CGCGAATCGC GCGGCGACGG CGGTTATGGC TCCCGCGAAT CGCGCGGCGA CGGCGGTTAT 
GGCTCCCGCG AATCGCGCGG CGACGGCGGC TACGGTTCCC GCGAACCGCG TGGCGACGGC 
GGCTACGGTT CCCGCGAACC GCGTGGCGAC GGCGGCTATG GCGCGCGCGA GCCGCGTGAA 
CCGCGCGAGC CCCGCGAGTC TTACGGCGCG CCGCAAGAAG GCGCATCGAC GCCGTCCGGC 
ACGCAGGAAC GCAACGGCAA CGGCCCGGTG ATCGTCACGC GCCGTCGCCG TTCGCTCGGC 
CCGACCGACG GCCAATAA 

 

Protein sequence

MANPAESHPQ NDFINAARKE RKRVEIYLVN GIRLTGCIES FDQYLVMLRT PVGLQGIYKR 
AISTIQLDTG GSRPGGRGPR AGGAHGGGGR PGGREGGGHG PYGSHGGSRE PRGDGGGYGA 
RESRGDGGYG SRESRGDGGY GSRESRGDGG YGSREPRGDG GYGSREPRGD GGYGAREPRE 
PREPRESYGA PQEGASTPSG TQERNGNGPV IVTRRRRSLG PTDGQ