Gene BMA1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1002 
Symbol 
ID3088210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand- 
Start bp1053936 
End bp1054985 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content69% 
IMG OID637561759 
Producthypothetical protein 
Protein accessionYP_102718 
Protein GI53725313 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0331823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACCG TTGACGAAGA CGACATCGGC ACGGCGAGCG GCCGCGACGA AGGCGACTGG 
GTGCCCAACC GGTTTTGCTT GCGCAACGCC TGGTTTCCCC TCGCGCATAC CTTCGAAATC 
GGCGAGCGCG CGTCGCGCTG GCAGATCTAC TCGCAGCCGT GCTATCTGTG GCGCGCACGC 
GGGCGCATCC ATGCATCGCG CCGGCATCCG GACCTGCCCG CCGCCCCCGC CGCGCCCGCC 
ATGCCCGCCG CGCCGGACTC GCCGTTCGAG CCGCCCGAGC GCTATCCGGT GGTCGAGCGA 
TTCGGCTACG CATGGATCTG GTACGGCGAC CCGGAGCGCG CGAGCGACGC GCTCGTGCCC 
GACGTGCCGT TCCTGCCGCG CGAAGGGGGG CTGCCCGAGC GCATGCAGGG CAACATCCGG 
CTCGACTGCT GCACGCCGCT GCTCGTCGAG AACCTGCTCG ACCTGACGCA CGCGGACTAT 
CTGCACGCGA ACCTGCTCGG CGACGAGCAA TCCGAAGAGG ATCGCGTCGA CGTGCGGTTC 
ACGTCCGAGA CGGTGACGAT GATCCGGCAG TGCACGAACA AATCGATCGC GCCGATCATG 
CGCTGGTTCG GCGGCGTGCG CGCGAAGTAT CAGGACGTTC ACGTCGTGAT CCACGTGCAT 
GTGCGCAGCT CCGTCGCGGT CGCGTACGGA CGCTACATGC CGGGCATCGA TCTGCCGATC 
TTCCACCCGT GCGTGCCGGA ATCGCGCGAC CGGTGCCGGC TCAGCTTCGC GTTGAACATG 
ACGCGAACGC CGTGGCTGCT GCGCGCGCTG ATGCCGCTCA CGCCTTACAT CGTGCTGCCG 
CAGGACAATC GCATGATCGG CCCGCAAAGC ACCCGCTACC GGGATGCCGG CGAGCGCCGC 
GATCTGTATT CGCGCTTCGA CCGCGCGGGG CTGCGGTATC GGCTCCTGCT GCAGCAGCTC 
GCCCGGCGGC AGCGCGACGG CGATTTCTCG TACGCCCCCG ATGCGCTGCC CGGCCAGGAC 
GCGCGCGGCA TTCTCGGCAT GCCGGACTAG
 
Protein sequence
MATVDEDDIG TASGRDEGDW VPNRFCLRNA WFPLAHTFEI GERASRWQIY SQPCYLWRAR 
GRIHASRRHP DLPAAPAAPA MPAAPDSPFE PPERYPVVER FGYAWIWYGD PERASDALVP 
DVPFLPREGG LPERMQGNIR LDCCTPLLVE NLLDLTHADY LHANLLGDEQ SEEDRVDVRF 
TSETVTMIRQ CTNKSIAPIM RWFGGVRAKY QDVHVVIHVH VRSSVAVAYG RYMPGIDLPI 
FHPCVPESRD RCRLSFALNM TRTPWLLRAL MPLTPYIVLP QDNRMIGPQS TRYRDAGERR 
DLYSRFDRAG LRYRLLLQQL ARRQRDGDFS YAPDALPGQD ARGILGMPD