Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA0855 |
Symbol | |
ID | 3090562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | + |
Start bp | 893967 |
End bp | 896774 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637561636 |
Product | Rhs element Vgr protein |
Protein accession | YP_102595 |
Protein GI | 53725110 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGA TCACGCAATT CACGTCGCTT TTCAGCGCTG CCAATTGTCT CTATTGTCTC GACGGTCCGG GCGAAATCGC GTCGCTGCAG ATCGAGCGCT GGGTGGGGCG GGAGACGCTC TCCGAGAACT TCCAGTGGGA TGTCTACGCG CTCGCGACCG ATCCCGGCCT CGACCTCGAC GCGATGCTCG GGCAGCGCGT GACGATCCGC ACGGCGCTCG CGAACGGCAC GAGCGCCGTG CGCAGCGGGC TCGTGGCGCA GGCCGAGTGC ATCGGCTACG ACGCCGGCCT CGCGCGCTAC TGCCTGCAGC TCGTGCCGTG GCTCGCCGCG CTCGCGCACG GCCGCGACGA GCGCACGTTC GTGCGGCAGG GCGTCGCCGA CGTGCTCGGC GCGGTGTTCG CGCCGTACGG CGCGATCGCC CGCTGGCGCT TCACCGCGGA CGCGAACCAG CGCATCGCGG AACTCGGCGC GCGCGACTAC CGCGTGCAGT ACCGCACCCA CACGCATTTC GATTTCGTCC GGCACGTGCT TGCCGAAGCG GGTCTCGGCT TTTGCTTCGT CGAGGAGGCG GACGCGCCCG CGGGCCACAC GATGCTGATC TTCGACGACA GCACGCAGTT GCCCGAGGAC GAGACTTCCG CGCGCATGGG CGGCGTGCCG CAGCGGCTGA GCGGCACGGC GACCGAGCCG GACGACGTGA TCGTCGGCAT CGGGCAGTCG CTGTCGCTGA CCGCGGATCG CGTCACGCTG ATCAGCAGCG ACTACCGCGG CAACCAGTCG ACGAGCGCGA CGGCGAGCCT CGGCAATCCG GCCGGATCGC GCGAGCTGTA CGACGACGTC GGGCCGGAGG CGTTCGACAG CCTGCGCGAG GCCGACGCCG CCGCGCGGCG GCACGCGGAC GCGATCGTCT CGGCGGCGCG CTTCTGGACA GGCTACGGCA CGTTGCGCAC CGCGCGCGCT GGCCGCGCGC TGCGCATCGC GGGCGCGACG TGGCGCATGT CGCGCGGCGG CGCGCCGGCG CCCGATGCGT TCGTGTTGAC GCGCGTCGAT CAGATCGGCA TCAACAATTT GCCCGCGACG GTGATGGAGC GCGTCGAGCG CAGCCTCGGC CCGCTGCCGC CCGCGAATCT CGACGCGCGC GTGCTCGCGC AGGCGAAGGC GGGCGGCTAT GCGAACCGGT TCGACGCCGC GCCGCGCGAC CAGGCATGGC GCCCGACGCT GGAGGACGGC ACCGGCCAGC GACTGAACCC GGTGCCGACG GCGCTCGGCG CGCAGACGGC GATCGTCGTC GGGCCGCAGG GCGAGACGCG GCCGGGCTCG ACGGGCCCGG TGCATACCGA CGCGCAGGGC CGGTTGCGGC TGCGCTATCA CTGGCAGGCG GACGGCGACG CGGGCACCTA TCCGACGCGC GCGATGCAGC GGCTCGCGAG CGAGGGGCAC GGGCTGCAGC AGACGCCGCG GATCGGCCAC GAGGTGCTCG TGCAGTTCGT CAACGGCCTC GTGCACCGGC CGATCGTGCT CGGCGGGCTG TTCAACGGCC GCGGCGAGGG CGGCGAAGCG CCGACGCTCG GCGGCGAAGC GGGGCAGCCG CTCGACGAAT CGGTCTACGC ACAGGCGAGC GACCACGCGG CGAGCGCGCA AGGCAATCTT GCGGGCGGCC ATAGCCCCGC GTGGCACGGC GCGGGCGGCG GCGCGAAGCG CCACGATCAC GCGGGCGCGC TGTCCGGCTT CAAGAGCCAG GAGTTCGACG GCCAGGGCTA CAACCAGCTC GTCGCGGACG ATACCGATCG CATGGGCCGC ATGCAGATGG CGACGACGCA CGCGGCGACC CAGCTCAATA TCGGCCATTT GCGGCATCAG GCCGACAACT ATCTCGGCAG CTTCCGCGGG CAAGGCGTCG AGCTGCGCTC GGACGCGTAC GGCGCGCTGC GCGGCGCGCG CGGCGTGCTG ATCTCCAGCT ATGCGCCGAC GGGGCCGTCG CAGCCGGCGG GCGATGCGTC GGCGCTGCAG TCGCTGCTCG CGCAACAGGC GGCGCTCGCG AAGCTTCTCG ACAAATCGGC GGACACGCAC AAGACCTTGC CGTTCGCCGC GCAGCGTGGC GCGCAGCGGG CCGGACAGTC GTCGATGAAC GGCGACGCCG CGCCGCTCGA CGCGCTCGGG AAGAGTTTCG CGACGACGGT CGGCGCCGAC GGCTACGCGC AGGCGTCGGC CGACGCATCG CGCCGCGCGA CGGACAATGC GCTGCCGCAT ACCGGCGACG CGGTGCTCGG CGTCGAGGCG AAGGGCGGCC AGGGGCTGCT GGCCGGCCAG TCGCTGCAAT GGGCGGCGGG CGAGACGCTG ACCATCGGCA GCGGCAACGA CACCAACCTC GCGGTCAACC GGACGTTGCG CGTGCACAGC GGGCAGGGCA TCGGCTGGCT TGCCGGCGCG AACGGCGCGA ACGGCGCGCA GGGCGTCGGC ATGAGCGTGA TCGCCGGCAA GGACGATCTG GCGCTGCAGG CGCAGCACGA CCTGATGGCG CTGCGCGCGC GCGACGATCT GAGGGTCGCG TCGATCGGCG CGGACGTCGA GATCGCGGCG AAGCAGACCG TGCGGCTCGC GGTCAGCGGC GGCGCGCATC TGACGATCGA AGGCGGCAAC GTCACGTTCG GCTGCCCGGG CTCGCTCGTC GTTCATGCGG CCCAGCATAC GTTCGTCGGG CCGGATCAAC TGGCTCCCGC GCTGCCGCAG TTTCCCGAGA AGGTGTGCGT CGAATGCCTG AAGCACGCGA TGCAATCGGG CAGCGCACTG GCCGGCAAGG CGATCTGA
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Protein sequence | MSVITQFTSL FSAANCLYCL DGPGEIASLQ IERWVGRETL SENFQWDVYA LATDPGLDLD AMLGQRVTIR TALANGTSAV RSGLVAQAEC IGYDAGLARY CLQLVPWLAA LAHGRDERTF VRQGVADVLG AVFAPYGAIA RWRFTADANQ RIAELGARDY RVQYRTHTHF DFVRHVLAEA GLGFCFVEEA DAPAGHTMLI FDDSTQLPED ETSARMGGVP QRLSGTATEP DDVIVGIGQS LSLTADRVTL ISSDYRGNQS TSATASLGNP AGSRELYDDV GPEAFDSLRE ADAAARRHAD AIVSAARFWT GYGTLRTARA GRALRIAGAT WRMSRGGAPA PDAFVLTRVD QIGINNLPAT VMERVERSLG PLPPANLDAR VLAQAKAGGY ANRFDAAPRD QAWRPTLEDG TGQRLNPVPT ALGAQTAIVV GPQGETRPGS TGPVHTDAQG RLRLRYHWQA DGDAGTYPTR AMQRLASEGH GLQQTPRIGH EVLVQFVNGL VHRPIVLGGL FNGRGEGGEA PTLGGEAGQP LDESVYAQAS DHAASAQGNL AGGHSPAWHG AGGGAKRHDH AGALSGFKSQ EFDGQGYNQL VADDTDRMGR MQMATTHAAT QLNIGHLRHQ ADNYLGSFRG QGVELRSDAY GALRGARGVL ISSYAPTGPS QPAGDASALQ SLLAQQAALA KLLDKSADTH KTLPFAAQRG AQRAGQSSMN GDAAPLDALG KSFATTVGAD GYAQASADAS RRATDNALPH TGDAVLGVEA KGGQGLLAGQ SLQWAAGETL TIGSGNDTNL AVNRTLRVHS GQGIGWLAGA NGANGAQGVG MSVIAGKDDL ALQAQHDLMA LRARDDLRVA SIGADVEIAA KQTVRLAVSG GAHLTIEGGN VTFGCPGSLV VHAAQHTFVG PDQLAPALPQ FPEKVCVECL KHAMQSGSAL AGKAI
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