Gene BMA0278 details

Gene Information

• Locus tag: BMA0278
• ID: 3089543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: +
• Start bp: 296438
• End bp: 296956
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637561136
• Product: type IV pilin, putative
• Protein accession: YP_102104
• Protein GI: 53724724
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4969] Tfp pilus assembly protein, major pilin PilA
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGCGCTC GCGGTTTCAC GCTGATCGAA TTGATGATCG TGCTCGCGAT CGTCGGCGTC 
GTCGCCGCGT ACGCGATTCC CGCCTATCAG GATTATCTCG CGCGCAGCCG GGTCGGCGAG 
GGGCTCGCGC TCGCCGCGTC CGCGCGGCTC GCGGTTGCCG AGAACGCGGC GAGCGGCAAT 
GGATTCTCGG GCGGCTACGT GTCGCCGCCC GCCACGCGCA ACGTCGATTC GATCCGGGTC 
GACGACGACT CCGGGCAGAT CGTCGTCGCG TTCACGACGC GCGTGGCGGC GGCGGGCGCG 
AATACGCTCG TGCTGGTGCC GTCCGCGCCG GATCAGGCGG ATACGCCGAC GGCGCGTGTC 
GCGTTGTCGA AGGGCGCCGT CCAGGCGGGG GCGATCACGT GGGAATGCTT TGCCGACGGC 
AAGGCGTCGT CGTCGCTGCC CGCGCCGGGC GCCGGCCCGC TGCCGACCGA TGCGCCGACG 
CTGGCCGGCA AGCTGGCGCC CCCCGAGTGC CGCGCGTGA 

 

Protein sequence

MRARGFTLIE LMIVLAIVGV VAAYAIPAYQ DYLARSRVGE GLALAASARL AVAENAASGN 
GFSGGYVSPP ATRNVDSIRV DDDSGQIVVA FTTRVAAAGA NTLVLVPSAP DQADTPTARV 
ALSKGAVQAG AITWECFADG KASSSLPAPG AGPLPTDAPT LAGKLAPPEC RA