Gene BMA0142 details

Gene Information

• Locus tag: BMA0142
• Symbol: def
• ID: 3090236
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: +
• Start bp: 153127
• End bp: 153630
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637561012
• Product: peptide deformylase
• Protein accession: YP_101982
• Protein GI: 53724672
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.394236
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTGC TGAACATTCT TCACTACCCC GATAAACGGC TGCACAAGGT GGCCAAGCCG 
GTCGCCAAAG TGGACGACCG CATTCGCAAG CTCGTCGCCG ACATGGCCGA GACGATGTAC 
GCGGCGCCCG GCATCGGCCT TGCTGCGACG CAGGTCGACG TGCATGAACG CGTGATCGTG 
ATCGACGTGT CCGAGGACAA GAACGAACTG CGCGTCTTCA TCAACCCGGA AATCGTCTGG 
ACGGGCGACG GCAAGCAGGT CTATGAGGAA GGCTGCCTGT CGGTGCCGGG TGTCTATGAC 
GAAGTGGAGC GCCCGGACCG GGTGCGCGTG CGCGCGCTCG ACGGCCAAGG CGAGTCGTTC 
GAGCTCGATT GCGAAGGGCT GCTCGCGGTG TGCATCCAGC ACGAGATGGA TCACCTGATG 
GGTCGCGTGT TCGTCCAGTA TCTGTCGCCG CTCAAGCAGA CCCGGATCAA GACGAAGATG 
AAGAAACTCG AACGCGCAAT GTGA 

 

Protein sequence

MALLNILHYP DKRLHKVAKP VAKVDDRIRK LVADMAETMY AAPGIGLAAT QVDVHERVIV 
IDVSEDKNEL RVFINPEIVW TGDGKQVYEE GCLSVPGVYD EVERPDRVRV RALDGQGESF 
ELDCEGLLAV CIQHEMDHLM GRVFVQYLSP LKQTRIKTKM KKLERAM