Gene BLD_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1990 
Symbolung 
ID6364259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand- 
Start bp2374123 
End bp2374764 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID642681199 
Producturacil-DNA glycosylase 
Protein accessionYP_001955933 
Protein GI189440852 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.236215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCGACG TGGAGCCCAC CATCCACCAT ATGGGCGATT TTCTTCGTGC GGAAAACGCC 
GCCGGGCGCC CGTGGCTGCC GGCAAGCCAC AATATTCTGC GCGCGTTCAC CATCCCGTTC 
GATTCCATCA AGGTGCTGAT TGTCGGCCAG GACCCCTACC CGACCCCGGG TCACCCGGTG 
GGTTTGAGCT TCTGCGTGGC GCCAAATGTT CACCCGCTGC CGAAAAGCCT GATCAATATT 
TATAAGGAAT TGGTTGACGA CCTTGGGGTG CCCATGCCCA CCAACGGCGA TCTGACACCG 
TGGACGGAAC GTGGGGTGAT GTTGCTCAAC AGATGTCTGA CTGTCGGCGT CGGGCGGCCG 
AATTCGCATC AGGGCAAAGG CTGGGAGGAA GTCACCGAGG CCGCGATTCG TGCGTTGAAC 
GCGCGCACGG ACGCCGACGG CAAGCCCCAG CCGCTGGTGG CGATTCTCTG GGGGCGTAAT 
GCGCAAAGCC TCGAGCCATT GCTGACCAAT GCCTTCATTA TCAAATCGCC TCATCCGAGT 
CCGCTGTCCG CTTCCCGCGG ATTCTTCGGC TCCAAACCAT TCTCCAGAGC CAATCAAGCC 
CTAGTCACCA TGGGTGCCGA CCCGGTGGAT TGGACTCTTT AG
 
Protein sequence
MADVEPTIHH MGDFLRAENA AGRPWLPASH NILRAFTIPF DSIKVLIVGQ DPYPTPGHPV 
GLSFCVAPNV HPLPKSLINI YKELVDDLGV PMPTNGDLTP WTERGVMLLN RCLTVGVGRP 
NSHQGKGWEE VTEAAIRALN ARTDADGKPQ PLVAILWGRN AQSLEPLLTN AFIIKSPHPS 
PLSASRGFFG SKPFSRANQA LVTMGADPVD WTL