Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1946 |
Symbol | |
ID | 6364235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 2319776 |
End bp | 2320309 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642681155 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001955889 |
Protein GI | 189440808 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00612369 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGC ATATTCTCAG CATTGAGATG CGAGCGGTGA CCAAAGCCGT CGACCGCTAT CTCGGTGAGA GCATGCCGCT TTCCGCTAAG GAAACCACCG GCGGCAACGC GCATATCATC ATGTTCTTGG CGCGTAACCG CGGCCGTGAG ATATACCAGC ACACCATCGA ACAGAAATTC TGCATCACCC GGTCCACCGC CTCGCGTGTG CTGGCCCTGA TGGAGAAGAA GGGCCTGATC GCCCGTGAAT CGGTGGAGCA TGACGCGCGC TGCAAGCGCA TCGTCCTGAC CGACAAGGCG GACGCGATCG TCGCCGATCT CAAGGCGAAC GGCGATCGGG TCGAACGGTT GCTGGTCGGC GGCTTCTCCG ATGGAGAGAA GGCCGCTCTG CGCGACTACG TCGCACGCAT GCGTGCGAAC ATCGAGCGCG CACAACGCGA ATTTGAACAT CAAACACTCC CTCAGTCACC TGTGGTGATG GCTCCCGATC AAGACGGAGC AGAGGTTGCT AACACGAAGG AGGAGAACGA ATGA
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Protein sequence | MDQHILSIEM RAVTKAVDRY LGESMPLSAK ETTGGNAHII MFLARNRGRE IYQHTIEQKF CITRSTASRV LALMEKKGLI ARESVEHDAR CKRIVLTDKA DAIVADLKAN GDRVERLLVG GFSDGEKAAL RDYVARMRAN IERAQREFEH QTLPQSPVVM APDQDGAEVA NTKEENE
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