| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1889 |
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| Symbol | prfA |
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| ID | 6363615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2243736 |
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| End bp | 2244824 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642681097 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001955832 |
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| Protein GI | 189440751 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.640153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGACG AACAGTTCCC GGCGGCGGCA ACCGCGCTTG AGGAGTACCA GTCCATCGAA
GAACAGATGG CAAGCCCCGA AGTCGTGTCC AACCCGGACA AGCTGCGCAA GCTGGGTCGT
CGTCACGCCG AACTGGGTGC CATCGTGGAT GCCTACAAAG CCTGGTTGCA GGTGAAGGAC
GATCTGGCAG CCGCTCAGGA GATGGCCGGC GAGGACGCCG ACTTCGCCGA GGAAGCCAAG
CGTCTTGAAG ACGAACTGCC CGGTGTCGAG GAGAAGCTGC GCACCGCGCT GATCCCGCGT
GACCCGGATG ATGCGCGCGA CACCATCATG GAGATCAAGG CCGGCACCGG CGGCGAGGAA
GCCGCACTGT TCGCCGGCGA CCTGCTGCGC ATGTACACCC GTTACGCCGA GAAGCGTGGC
TGGAGCGTGA ACGTGCAGTC CGAGAACACC ACCGAGCTCG GCGGCGTCAA GGACGTGCAG
ATCGCCATCC GCGCCAAGGG CACGCCCGCT CCCGAAGACG GCGTGTGGGC TTCGATGAAG
TACGAGGGCG GCGTACACCG TGTGCAGCGC ATCCCCGTCA CCGAATCGCA GGGCCGTATC
CAGACTTCCG CTGCCGGCGT CATCGTGTTC CCCGAGGCCG ACGAGGATGA CGACGAGATC
GAGATCGATC CGAAAGACCT GAAAATCGAC ATCTTCATGA GCTCCGGCCC CGGCGGCCAG
TCCGTGAACA CCACGTATTC CGCCGTGCGC ATGACCCACC TGCCAACCGG AATCACGGTG
AACATGCAGG ATGAGAAGTC GCAGATTCAG AACCGTGCCG CCGCGTTGCG CGTACTGAAG
TCCCGCCTGC TGGCCATGAA GCATGAGCAG GAGGCCGCCG AGGCCGCCGA CATGCGTCAC
TCGCAGGTAC GTTCGCTTGA TCGCTCCGAG CGAATCCGCA CATACAACTT CCCGGAAAAC
CGTATCGTCG ACCATCGCAC GAATTACAAG GCTTACAACC TTGACGCCGT GCTCGACGGC
GACCTGCAGG CCGTCATCGA TTCCGACATC CAAGCCGACG AGGCCGACCG TCTGGCCAAT
CAGAAATGA
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| Protein sequence | MADEQFPAAA TALEEYQSIE EQMASPEVVS NPDKLRKLGR RHAELGAIVD AYKAWLQVKD
DLAAAQEMAG EDADFAEEAK RLEDELPGVE EKLRTALIPR DPDDARDTIM EIKAGTGGEE
AALFAGDLLR MYTRYAEKRG WSVNVQSENT TELGGVKDVQ IAIRAKGTPA PEDGVWASMK
YEGGVHRVQR IPVTESQGRI QTSAAGVIVF PEADEDDDEI EIDPKDLKID IFMSSGPGGQ
SVNTTYSAVR MTHLPTGITV NMQDEKSQIQ NRAAALRVLK SRLLAMKHEQ EAAEAADMRH
SQVRSLDRSE RIRTYNFPEN RIVDHRTNYK AYNLDAVLDG DLQAVIDSDI QADEADRLAN
QK
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