| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1879 |
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| Symbol | xynB5 |
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| ID | 6362746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2234021 |
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| End bp | 2235793 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642681086 |
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| Product | beta-xylosidase |
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| Protein accession | YP_001955822 |
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| Protein GI | 189440741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAGCG ACAATGAACG TTGCGGCGAC CGTGGCCGCG AATGTACCAT AACCGTCTCC
AACCCGGTGT TGCGTGGCAT GTACCCGGAC CCGTCCTGGA TATGGGATAC GACGCGCGAG
GAAATCGTGC TGGTCAACTC CTCGTTTGAA TTGGTGCCGG GGTTGCCCAT TCATACGACC
CGTGATCTTG TGACGTGGAC GCGCACGGCG AATGCGGTGG ATGAGACGAT GTCTCATCGG
CTGCTCATTG ATGGCGTCGA GGATTCCGGC GGCCTGTACG CGCCGACCAT TCGCCGTATC
GGCGGGCGAT ATGTGATCGT ATGCACCGTG GCCCGCGTGG ATGAGGTGAA GGCGCTCGCT
GCGGGATGCT CGCAGAAGGA TATTGATAAC TGCCGTGACG CCCAAGGCAA TTTCGTCATC
GAGGCCGATG AGTTGACCGG ACCATGGCGC GGCCCGTACT GGGTGGCCGG GGCCGAAGGC
ATTGATCCGG ACATCTTTGA AGACGGCGAT GGCACAGTGT GGTGGACGCA AACGCGCCCG
GCATTACACC CGCAGTGGGA TGGTCAAACC GAAATCTGGA CGCAGCCCAT CGCCCCAGGC
ACGTGGACGT TGCAAGACCA TAAAACCGTG ATTTGGCGCG GCTATGGCAT GGATGCGGTA
TGGGCTGAAG GGCCGCATTT GTACCGGGTG GGCGATTACC TCTACCTGAT GACCGCCGAG
GGCGGCACCA GCTTCGAGCA CAGTGAGATG ATAATGCGCA CGCACGCACC GCGCGGATTC
GCGGCGGCGC TCGCCGGTTT TGAGAAGAAC CTTGCTGCGC AAGATATCTG GATTGAGCCG
GCGCGTGACG GTGAACGAAG CGTGGTGGGC CGCGATGACC GGCTGTTTGA GGCTTGCAAA
CGCAATCCGA TCCTCACACA CCGTCATTTG GGAGCGGGGG AGCCAGTCCA ATGCGTTGGG
CACGCCGATC TGCTGCTGCA TCCGACCGTC GGCTGGCTGC TCGCGTGTCT TGGCGTACGC
GAGACTCCGG GCGAGGAACC CGGAGAAACG TTCAGCTACT GTGGCCGGGA AACGTTCGTG
GCACCGGTCG TATGGCAGCA CAATCCGGTC TCGTGGAAGC TGGACGGTGG GGAGCCGAAT
AAGCGTATCG ATATCGTCGA TCCCGGTTGG CCTGTCGTGG CTCCGGGGCT TGGCCGGCTT
CCCGAGAAGT TGGTCGTGGA CGTTGACGAG GATGGATTGC CATGTGCAGT GAGGGGTGTG
GACTCTGCGA GGTGTGATTG CGCTGCTGGT GATAATGCCG CATGCTCTGC TGAGCTCATC
CAGCTCGACG ATACCCGCCT AGTCGGCGTT CGAGGCCGTG ACGATTACCG GTTCCTGCGC
GTCGACGGGC AGGAATATGC CGCGTTCACC CGGCCCGAAT ACACGATGAT GATGCATCAG
GATTCCACCC ATGTTGTCAT GGTCATGGCG GAAGCGGAAT CCGGCCAATT GACGGCCGAA
ATCACCGATA GGGGAGATAA GCGGTGCATT GCGCTTGGAG CGCTTGGGGC CAACGAATGG
TTCGGATTGC GCTTGCATGG CAATCGTTTG GAATTCCTTG CCGGGCAGCC TGCACCTGAC
AGCATTGATG AGGGAACAAT GCCTGATATT GCACTAATTG CGCATGCGGA CGTTACTTAT
GCTCGTATCA TGGCAGATTG TGATGCGCGA TTCCTCAGTA CCGAATGGGC CGGCGGATTC
GTGGGTTGCC TGATCGGCGT AAAACGGCGG TAA
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| Protein sequence | MASDNERCGD RGRECTITVS NPVLRGMYPD PSWIWDTTRE EIVLVNSSFE LVPGLPIHTT
RDLVTWTRTA NAVDETMSHR LLIDGVEDSG GLYAPTIRRI GGRYVIVCTV ARVDEVKALA
AGCSQKDIDN CRDAQGNFVI EADELTGPWR GPYWVAGAEG IDPDIFEDGD GTVWWTQTRP
ALHPQWDGQT EIWTQPIAPG TWTLQDHKTV IWRGYGMDAV WAEGPHLYRV GDYLYLMTAE
GGTSFEHSEM IMRTHAPRGF AAALAGFEKN LAAQDIWIEP ARDGERSVVG RDDRLFEACK
RNPILTHRHL GAGEPVQCVG HADLLLHPTV GWLLACLGVR ETPGEEPGET FSYCGRETFV
APVVWQHNPV SWKLDGGEPN KRIDIVDPGW PVVAPGLGRL PEKLVVDVDE DGLPCAVRGV
DSARCDCAAG DNAACSAELI QLDDTRLVGV RGRDDYRFLR VDGQEYAAFT RPEYTMMMHQ
DSTHVVMVMA EAESGQLTAE ITDRGDKRCI ALGALGANEW FGLRLHGNRL EFLAGQPAPD
SIDEGTMPDI ALIAHADVTY ARIMADCDAR FLSTEWAGGF VGCLIGVKRR
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