Gene BLD_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1837 
SymbolfucP4 
ID6364422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp2187311 
End bp2188519 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID642681043 
Productfucose permease 
Protein accessionYP_001955780 
Protein GI189440699 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0765737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCA CAGCCCCGAA CTACAACCAC ACTGTCACCG CCTGCTTCGT GGGATACATC 
ACTCAGGCGG TAATCAATAA CTTCATGCCG TTGCTGTTCG TCACGTTCGC GGCGACACTC
GGCATCGACA TGGCGCGGCT TTCCGCCCTC ATCACCGTCA ACTTCGTCAC CCAACTGATC
GTGGACGTGC TGGCCGGCAA GTTCGTGGAC CGCATCGGAT ACAAGCCGTG CATTATCGCC
GCCCACCTGG CCGCCCTTGC CGGACTGCTG GCGTTGGGCT TGCTCCCCAC CCGCGTGCCG
GACCCGTATC TCGCGATTCT GGCGGCGATT TTCCTCTACG CGCTCGGCGG CGGACTCATC
GAGGTCATGG TCTCCCCCAT CGTCGAGGCC TGCCCGAGCG AACACAAGGC CAAGGCGATG
AGCCTGCTGC ACTCCTTCTA CTGCTGGGGC CAGCTCGGCA CCGTGGCCAT CTCCACGCTG
TTTCTGTTTG CGTTCGGCAC CGGCTCATGG CCGGTTCTCG CTTGCTTGTG GGCGATTGTG
CCTGCCATCG GCATCGCGAT GTTCGCTGGC GCTCCCATGC CGCGCATTGT GCCGGAAGGC
ACGGCGACCA TGCGGTTCGC CGACTTGTCG AAGAAGCCGG TGTTCTACCT GATGTTCCTT
ATGATGCTGT GCGCGGGCGC GGCCGAACAG GGCATGAGCC AGTGGGCCAG CGCGTTCGCC
GAGTCCGGTC TGGGCGTGAC CAAGGTGATT GGCGACTTGG CGGGACCTGC CGCATTCGCC
CTGATGATGG GCCTGTCCCG CACGATTTAC GGAGTGCTGG GGCATCGACT GGATCTCACG
GCATTCATTG CCAGCAGTTC CGTACTGTGC GTGGCCATGT ATCTGACCGC AGCCCTAACC
ACGGCACCGG TACTGGGTCT GCTTGCCTGT GCGCTCACCG GTTTTTCAGT GGGTATTATG
TGGCCCGGAA CGTTCTCGAT GGCTGCAGAC GCCATGCCCG GTGGCGGTAC GCTGATGTTC
GCGCTACTAG CCGTGGCCGG CGACCTCGGA TGCGCCGGCG GCCCTGCCGT AGTGGGACTG
GTGGCCTCTG CCAATGGCGA CAGTCTTAAG ACCGGGTTGC TGTTCGGATC GATGTTCGCA
TTGGTGCTGT TGGCGTGCGT AGTTGCGGCG AGGAAGACAG TTGTTGGCGA ACGCGAGCCT
TTGCATTGA
 
Protein sequence
MSATAPNYNH TVTACFVGYI TQAVINNFMP LLFVTFAATL GIDMARLSAL ITVNFVTQLI 
VDVLAGKFVD RIGYKPCIIA AHLAALAGLL ALGLLPTRVP DPYLAILAAI FLYALGGGLI
EVMVSPIVEA CPSEHKAKAM SLLHSFYCWG QLGTVAISTL FLFAFGTGSW PVLACLWAIV
PAIGIAMFAG APMPRIVPEG TATMRFADLS KKPVFYLMFL MMLCAGAAEQ GMSQWASAFA
ESGLGVTKVI GDLAGPAAFA LMMGLSRTIY GVLGHRLDLT AFIASSSVLC VAMYLTAALT
TAPVLGLLAC ALTGFSVGIM WPGTFSMAAD AMPGGGTLMF ALLAVAGDLG CAGGPAVVGL
VASANGDSLK TGLLFGSMFA LVLLACVVAA RKTVVGEREP LH