Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1520 |
Symbol | |
ID | 6363780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1796312 |
End bp | 1800148 |
Gene Length | 3837 bp |
Protein Length | 1278 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642680710 |
Product | hypothetical protein |
Protein accession | YP_001955463 |
Protein GI | 189440382 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.334593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAA ACGATAAGGG CAAGGGCGCT CTTATCGCGG CAATTACCGC CGCGGCAACG CTATTGTCAT GCGGGCTGGC CGCTGCAAGT GCCAGTGCGG CAGGTGTGGA TTACCTGCCT ACCATCGGCC AAGTGCCGAC ATACACCAAG TTCCAGCCCA CAGCCGATCC GGGCAAGAAC GCTAGCGATT ACTTCCAGCC ATATTGGTAT GCCAAGAACG CCAATGATAA TGGCGGCACA CACATCCAAG CGCACGGTGG CCAAGTGGTC AAGGTCGGCG ACGCCTACTA CTGGTATGGC GAAGACCGTT CTAACGGTTA CGACAACAGC CCCGGTGTCC ATGCTTATAT GTCGACAGAT CTATACAACT GGACCGATCT TGGTGTGGCG CTGCGTGCGG TGACCAGCAA ATCTCAGTTG ACGGATAAGA GCAATGCCGA TTACGCCTAC TTCGACAAGG CCTACAACCT GACCAAGTCC GACGGCAGTG TGGACGCTGC CAAGGCCGAC GCAATCTTCC CGTACCTCAA CACCAACCCC GATCAGGATG GTGATGGCGC GGTTGATTCC GTACAGGGCA TTTTCGAGCG TCCGAAGATC ATCTACAACA AGAAGAACAA GCAATACGTG CTGTGGTGGC ATTCCGATGG AAGCACCACG CCGGGCGGTT CCAACTATGC ACGTGCACTT GCGGGCGTGG CTGTTTCCGA CAATCCGGCG GGCCCGTTCA CTATGGTGGG TGCCTATCGT TTGCCTAACC AGAACAATTG GAAAGAAGCC GCAGGTAACC CCAGCTGGGG TGAGAACGGT GACAGCCGCG ATATGACTGT GTTCGTGGAC CCGAAGGACG ACAGTGCCTA TGTACTGTAT TCTTCCGAAG CCAATGCCAC GCTGTACATC GCCAAGCTTA ACGATGATTA CACCAATGTA GTCAAGACCA CGAATGTGGA CCAGTCCGAG GGACAAAAGC AGTACTCTGC TGACGGGCAG TACCCATACA TTCTTGCAGA CTCTACTACG GATGCCCCGG TGCGTGGCGA AGATTTCCAA ATCGTCAAAC AAAATGGTTC GCTGGAAGCT CCTGCCGTAT TCCAATATGA CGGGCGTTAC AACATCATCG CATCTGGTGC AACCGGCTGG GCCCCGAACA AGCAGACCTA CTACACCGCC GACTCCATGC TGGGAAACTG GACCCGTGGC GTGGAAAAGG ACGATGTCAA CGAGAACACG TGGTACAACA ACATGCCGGA AGGCGCGGAT GGTCTGTTGT CCGTGGGCGA TACCCGCGGC ACCACATTCG GTTCGCAGTC GGCTAGTGTG CTCGCAGTAG ACCAGGAGAA AGGTCACTTC ATCTACCTTG GTGACCGTTG GGATTCCGGT AAAGCCGATT CCACCTATGT TTGGCTGCCG CTGACCATCG GTGAGAACGG CACCATCGAA ATGCACAATC CTGCTCAAGA AGGCGAGCCC GACGGTTGGG ATCTGAGCTA TTGGGGCAAC CATGGTAGCG CCAAGGGCAA GCTGGTCAAC TGGACTGTGG AAACCGGCGA TGATCTCCCG AAGACCGTGA ACACGGGCGG AACCGTTACT CTGCCGGACA CCGTCAACGT CAAGGAAGGC GACGATACCA TTGCTACCAA GGTGACATGG AATGTGGAAG GCGGTACGGC AGTCAGCAAG TCGACCAAGG CTGCTGGTAA CACCTACGCA TTCAATGTGC CGGGAACCTA CACCATTACG GGCACTCTTG CCGAGAGCAG TAACTTCAAT CCGGGCCGTA CATTCCGTAG AACCATCGAT GTTTCCTGCT CCAACCCGAT TTCCGGAAGT TGGAAGGAAG CTCATTGGAA GGGCGGCAGC GCGTGCCAGG TTTCTGCGTC CGGCGGTGCT TATGACTTCA CGATTACGGA CAACGCCAAT CGTGGTGTCT GGACGGATCG CAACGAGGGC AGCGCGGTGT ACCAGCCTGA TGCTCTGGAC GTGAACGAAA CGTTGGAAAC CACGGTCAAG CCGCTCGACT TGGGCGGTAA TGGCGATCCG CGTGCCGGCC TGGTGGTTCG TAACGGTCTT GCTGACGCTA ACGGCGGCAA GGGATATGCC ACGTTACTTG CCAGCCCAAG CGGCATTTAC ATGCAGTACG ATTCCAATGC CGATGGCTAC ATCGATAAGG AAACATCGCA TGTTGGTGCC GGCTTCGGCG ACCAAGTGCA ACTCAAGCTG GAGCGCGCCG CAACCGATAC CCTGAAAGGC TACTGGCGTG CTTCCGCGAA CGATGAATGG CAGGATGTCG CTACGGTAAC GCTGACCGGT GCGGACGCAA CCGGGCTCGA TGCCGGTGTC TTCGCCACGT CGAACAGCAA TGCCGGCGCA TTCACCGTGG CCTTCAACGG CACTGCGTTC GGTTCGCAGA CTGCTGCTGT GGAGTCCATC GCGGCTAAGG ACCCTGAAGC CACTATCGCC AAGGGGCAGA TGCTCGCGCT TCGGGACGTG ACGGTTACCG CCACGCTCAC CAATGGCAAA ACGCGTGTGC TGGAGCCAAG CGAATACACG CTGGAAGGCT TCGACACCAC CAAATTGGGC GAGCAAACCG TGACGGTGCG TCTTGTCGCT GATTCTTCAG TAACCGCCAC GTTCACCGTG ACTGTGGAAA GCAACCTTGC CCGGTTGTTC TGCTCGTCCG CTGCGGCCTC GAAGTATGAG CCGGCCAGTA GCTGGGCCTC CGCTTCTACG GCCGACCTGA CTTGCGACAA CAACCTGAGC ACCAACTGGT CGAACTGGGG CACCGGCGAC ACCTCGCCGT GGCTCAGCTA CACCTTCGAT AAGGCATATC AGCTGGGCAA GCTCAGCGTT GCGGTGGATA AGGCCAAGGG CGAGGCCGCT CCGAAGAGCT TCACTGTATC GTACCTAGCT GAAGACAACG CCACGTGGAC TGATGCCACG CTGCCGGCAG TCACTGTGAA TGGTGCTGCT GGAGCCGTGA CGGAAGCCGA TGTGAGCGCT CTGCCCGCCA CCAAGGGCAT TCGCCTCAAC TTCACCTACG CCGATGGCAA TGACTATGCC AAGATCGCTG AAGTACGCAT CGCCGAAGGT GAAGCAACGC CAAAGCCGCA GCCGTCTAGT AACGCCAATC TTGCTGATCT GACTGTGGAT GGCAAGACGG TTGACGGATT CTCCGCGGAT ATCACCGAAT ATGCCGGTGC GCTGGCCGGA GACGCTGCTT CTTACCCGAC GGTGGAGGCG ACTGCTGCTG ACGCGAAGGC TACGGTGCAG GTGGAGCAGG CTTCGACCGA GAACAGCGGC GTGGCCACGG TGACTGTAAC TGCTGAGGAT GGCACGGCGG AAACCTACAC AGTGACATTC GGCGAACTGC CTCAGTTGGC CGAGCTTGCT GTGGAAGTGA CCAAGGATTC CTATCAGGTA GGCGATAAGT TCAACGCTGC CGATGTGAAG GTATCCGCCA TTTACAAAGT CGGCGATACC GAAACGCTGC GCAAGCTGAT TGATCCAACT GATGGTGATC TGAAGTTCAC TGGCTTTGAT TCTGCCACCG CAGGCACGAA GACCATCACC GTCTCTTATC GTGGCGTGAA CGCGACGTTC GAAGTCACGG TCGCGGCCAC GGAGGTCACT CCCGGCCCTG GAGAGCAGAA GCCCGGCGAT ACCAACAATC CTGGCAACAC TGCTAAGCCC GGTAACACTG CCACGAATAA GCCGGCTGCT AATGGCGCTG CGCCCCTTTC GAATACGGGT GTTGCCGTGG CTGCCATTGC GGTCGTGGTT GTGGTGCTGA CAGCTGCGGC TGGTGCCTTG CTCGTCATCC GCAAACGCCG CGCATAA
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Protein sequence | MKINDKGKGA LIAAITAAAT LLSCGLAAAS ASAAGVDYLP TIGQVPTYTK FQPTADPGKN ASDYFQPYWY AKNANDNGGT HIQAHGGQVV KVGDAYYWYG EDRSNGYDNS PGVHAYMSTD LYNWTDLGVA LRAVTSKSQL TDKSNADYAY FDKAYNLTKS DGSVDAAKAD AIFPYLNTNP DQDGDGAVDS VQGIFERPKI IYNKKNKQYV LWWHSDGSTT PGGSNYARAL AGVAVSDNPA GPFTMVGAYR LPNQNNWKEA AGNPSWGENG DSRDMTVFVD PKDDSAYVLY SSEANATLYI AKLNDDYTNV VKTTNVDQSE GQKQYSADGQ YPYILADSTT DAPVRGEDFQ IVKQNGSLEA PAVFQYDGRY NIIASGATGW APNKQTYYTA DSMLGNWTRG VEKDDVNENT WYNNMPEGAD GLLSVGDTRG TTFGSQSASV LAVDQEKGHF IYLGDRWDSG KADSTYVWLP LTIGENGTIE MHNPAQEGEP DGWDLSYWGN HGSAKGKLVN WTVETGDDLP KTVNTGGTVT LPDTVNVKEG DDTIATKVTW NVEGGTAVSK STKAAGNTYA FNVPGTYTIT GTLAESSNFN PGRTFRRTID VSCSNPISGS WKEAHWKGGS ACQVSASGGA YDFTITDNAN RGVWTDRNEG SAVYQPDALD VNETLETTVK PLDLGGNGDP RAGLVVRNGL ADANGGKGYA TLLASPSGIY MQYDSNADGY IDKETSHVGA GFGDQVQLKL ERAATDTLKG YWRASANDEW QDVATVTLTG ADATGLDAGV FATSNSNAGA FTVAFNGTAF GSQTAAVESI AAKDPEATIA KGQMLALRDV TVTATLTNGK TRVLEPSEYT LEGFDTTKLG EQTVTVRLVA DSSVTATFTV TVESNLARLF CSSAAASKYE PASSWASAST ADLTCDNNLS TNWSNWGTGD TSPWLSYTFD KAYQLGKLSV AVDKAKGEAA PKSFTVSYLA EDNATWTDAT LPAVTVNGAA GAVTEADVSA LPATKGIRLN FTYADGNDYA KIAEVRIAEG EATPKPQPSS NANLADLTVD GKTVDGFSAD ITEYAGALAG DAASYPTVEA TAADAKATVQ VEQASTENSG VATVTVTAED GTAETYTVTF GELPQLAELA VEVTKDSYQV GDKFNAADVK VSAIYKVGDT ETLRKLIDPT DGDLKFTGFD SATAGTKTIT VSYRGVNATF EVTVAATEVT PGPGEQKPGD TNNPGNTAKP GNTATNKPAA NGAAPLSNTG VAVAAIAVVV VVLTAAAGAL LVIRKRRA
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