| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1196 |
|---|
| Symbol | ddpA3 |
|---|
| ID | 6363398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1368010 |
|---|
| End bp | 1369476 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642680372 |
|---|
| Product | dipeptide ABC transporter periplasmic protein |
|---|
| Protein accession | YP_001955139 |
|---|
| Protein GI | 189440058 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.419054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCACTCG GCGCACTCGT GGTTGTGGGA TGGACGTTCA TGCAAAACCG GTTCCAGCCG
GGATCGTCCC TCGATGCCGA TGTGACCATT GGCATCGACG ATATGCCGCA ATCCTTGGAT
ATTCGGTCCG ATTCCTCTGC GGCAGCCGAA CGCCTGCTCG TCGACAATGT GTATGAGACA
TTAGTGACCG TCGATCAAGA CAACAAGCTT CAGCCGGGAC TGGCGACAAG CTGGAAGACT
TCCGATGACG GACTGACCGT CACCCTGACA CTGCAATCGG GCGTCACCTT CTCGAACGGC
CATACGTTGG ACGCCTCGGA CGCCGTGTGG TCGTTGCAAC AGAACGTGAC CAACAAGGTG
GCGGACGTCG ACGAATTGGG CAATCTGGCG TCGGTCGCCA ATCCGAACGC CACCACGGTG
GTCATTACGC TTGCCAAGCC CAATCCGACG CTGCTGCGAG CGCTGTCCGG CAGACTCGGC
ATTGTCTACG ATTCCGAGTC GTCCAGTGCC GATTATCAAC GCAAGGCCAT AGGTTCCGGA
CCATTCACCG TGGCCGATTT CCAGCCTGGC CATTCCCTGA AGCTGGCGCG CAGCGATACC
TACCATGGCA CCAAAGCGGC CAGCAATGTC GTTGAATTTA TGCAATACTC CGACGCCGAT
GCGCTCAGCA AGGCCCTGAC CGACGGCAGT CTCGATATGG CGGCACCGGT TTCGGCTTCG
ACGGCCACCG GTTTGAACGG CAAGGATGGC CTGACCGTCA AGGAGGGGGC CACTACGGAT
AAGGTGCTGC TGGCCTACAA CAACGGCACC GATTCGCTGC TCTCCGACGA ACAGGCGCGT
AAAGCCTTCC GCTATCAAAT CGACGCAGCC GGCATCGCCT CCGCCCAACC CGACGCAGCC
GGAGCATTGG GCGGCCCCAT CAGCCTGCTG GAACCCGGAT ACGAAGATTT GACCGGACTG
TACCCGCATG ACGAAAACCA AGCTGGGCAG ATGTTCTCCT ACTTTGGTGC GCAATACCTG
ACTACGGTGA ATCTGGTGGT TCCCGAAGAA TACCGGTCGT TGGCCGAAAC CATCAAGCAG
CAGATCGAGC GGCAGCCGCG CCCCACGGTG AACCTTGAAG TGCTCTCCGA TGAGGATTAT
GCCAAACGAA TCAAGGACGG CAAATGGGAA CTGACCGTGA TGAGCATGGA CGGCACGGAT
GATGCCGGCA TATTCGCCGA CCCCGATTCC ATGTTCCATT ACGACCATAC CGAAGCGCAA
CAGGCCTATG CGGATGCTCG CGCCGCCACT AATGACGCCG ATTATGAGGC ACGAATGAAG
GCGTACGCCC GGCTGATCAG CGAGGATGCG GCCAGTGATT GGCTGTATAC CCGCAAATGC
TTCACTGTGG CGTCCACCAA GGTCTCCGGC TACCCGACCT CGATGATCAA TCGCCGCATG
CCGCTGGCCG GGTTGACGGT GAAGTAG
|
|---|
| Protein sequence | MALGALVVVG WTFMQNRFQP GSSLDADVTI GIDDMPQSLD IRSDSSAAAE RLLVDNVYET
LVTVDQDNKL QPGLATSWKT SDDGLTVTLT LQSGVTFSNG HTLDASDAVW SLQQNVTNKV
ADVDELGNLA SVANPNATTV VITLAKPNPT LLRALSGRLG IVYDSESSSA DYQRKAIGSG
PFTVADFQPG HSLKLARSDT YHGTKAASNV VEFMQYSDAD ALSKALTDGS LDMAAPVSAS
TATGLNGKDG LTVKEGATTD KVLLAYNNGT DSLLSDEQAR KAFRYQIDAA GIASAQPDAA
GALGGPISLL EPGYEDLTGL YPHDENQAGQ MFSYFGAQYL TTVNLVVPEE YRSLAETIKQ
QIERQPRPTV NLEVLSDEDY AKRIKDGKWE LTVMSMDGTD DAGIFADPDS MFHYDHTEAQ
QAYADARAAT NDADYEARMK AYARLISEDA ASDWLYTRKC FTVASTKVSG YPTSMINRRM
PLAGLTVK
|
|---|
| |