| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1125 |
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| Symbol | atpA |
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| ID | 6364634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1315163 |
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| End bp | 1316794 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642680300 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001955069 |
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| Protein GI | 189439988 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.826073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAC TGACCATCGA TCCCGCCTCG ATTCGCAAGG CCCTCGACGA CTTCGTGTCG
TCGTACAAGC CGAGCGACAC CCCCACCCAG GAAGTGGGCT ATGTCGCCAC GGCCGGTGAC
GGCATTGCAC ACGTGACGGG ATTGCCTGGT TGCATGGCCA ATGAGCTGCT GACGTTCGAA
GACGGCACGC TCGGCCTGGC GTTCAACCTT GACGCCCGTG AGATCGGCGT GGTGATCCTC
GGCGATTTCG CTGGAATTGA GGAAGGCCAG GAAGTGCGAC GCACCGGCGA AGTGCTCTCC
GTGCCCGTCG GCGACGGCTA TCTCGGCCGC GTCGTGGACC CGCTGGGCAA GCCGCTCGAC
GGCCTCGGCG AGATCCAGGG CATTGAGGGT CGTCGTATCC TCGAAGCCCA GGCCCCCGAC
GTGATGCACC GCCACCCGGT CGACGAGCCG CTGTCCACCG GCCTCAAGGC CATCGACGCG
ATGACCCCGA TCGGCCGCGG CCAGCGCCAG CTCATCATCG GCGACCGCCA GACCGGTAAG
ACCGCCATCG CGATCGATAC CATCATCAAC CAGAAGGCCA ACTGGGAATC CGGCGACCCG
AAGAAGCAGG TCCGCTGCAT CTACGTGGCC ATCGGCCAGA AGGGCTCCAC CATCGCCTCG
GTGAAGCAGA GCCTGGAAGA CGCCGGCGCC ATGGAGTACA CCACCATCGT GGCCTCCCCG
GCAGCCGATT CCGCTGGCTT CAAGTACATC GCCCCGTACA CCGGCTCGGC CATCGGCCAG
CACTGGATGT ACAACGGCAA GCATGTGCTC ATCGTCTTCG ATGACTTGTC CAAGCAGGCA
GAGGCCTATC GTTCGATTTC CCTGCTGCTG CGCCGCCCGC CGGGGCGTGA AGCCTACCCG
GGTGATGTGT TCTACCTGCA CTCCCGCCTG CTCGAACGTT GCGCCAAGGT CTCCGATGAC
CTGGGCGGCG GTTCGATGAC GGGTCTGCCG ATCGTCGAGA CCAAGGCGAA CGATGTGTCC
GCCTACATCC CGACCAACGT GATCTCCATC ACTGACGGCC AGATCTTCCT GCAGTCCGAT
TTGTTCAACG CCAACCAGCG CCCCGCCGTG GACGTCGGTA TCTCCGTCTC TCGAGTCGGT
GGCGCCGCAC AGACCAAGGC TCTGAAGAAG GTCTCCGGTA CGCTGAAGAT CTCCCTGGCA
CAGTACCGTT CGCTGGAATC CTTCGCCATG TTCGCCTCCG ATCTGGATGC GGCTTCCAAG
GCCCAGCTGA CCCGTGGTGC CCACCTGACC GAGCTGTTGA AGCAGCCGCA GTTCCACCCG
TACTCGCCGG AACAGGAAGT CGTGTCCGTA TGGACCGGCA CCCACGGCAA GCTCGACGAC
CTCGACCTGA AGGACGTCCT TCCGTTCGAG CAGGGACTGC TGGACTACAT CGACCACAAC
ACCGATATCC TCAAGACCAT TCGCGAGACC GAGGAATTCA CCGCCGACAC CGAGGCTGCC
CTCGATAAGG CCGTGGACGA GTTCCGTTCG ACGTTCGTCT CTTCCGCCGG CAAGCCGCTG
GTCGAGAAGA AGCCGGACGT TGACAAGGCC GCGCCGGTCG ATCAGGAAAA GATCGTGGCG
GGAGAAAAGT AA
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| Protein sequence | MAELTIDPAS IRKALDDFVS SYKPSDTPTQ EVGYVATAGD GIAHVTGLPG CMANELLTFE
DGTLGLAFNL DAREIGVVIL GDFAGIEEGQ EVRRTGEVLS VPVGDGYLGR VVDPLGKPLD
GLGEIQGIEG RRILEAQAPD VMHRHPVDEP LSTGLKAIDA MTPIGRGQRQ LIIGDRQTGK
TAIAIDTIIN QKANWESGDP KKQVRCIYVA IGQKGSTIAS VKQSLEDAGA MEYTTIVASP
AADSAGFKYI APYTGSAIGQ HWMYNGKHVL IVFDDLSKQA EAYRSISLLL RRPPGREAYP
GDVFYLHSRL LERCAKVSDD LGGGSMTGLP IVETKANDVS AYIPTNVISI TDGQIFLQSD
LFNANQRPAV DVGISVSRVG GAAQTKALKK VSGTLKISLA QYRSLESFAM FASDLDAASK
AQLTRGAHLT ELLKQPQFHP YSPEQEVVSV WTGTHGKLDD LDLKDVLPFE QGLLDYIDHN
TDILKTIRET EEFTADTEAA LDKAVDEFRS TFVSSAGKPL VEKKPDVDKA APVDQEKIVA
GEK
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