| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1110 |
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| Symbol | potB |
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| ID | 6364069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1299592 |
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| End bp | 1300542 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642680284 |
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| Product | spermidine/putrescine ABC transporter permease protein |
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| Protein accession | YP_001955054 |
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| Protein GI | 189439973 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.180562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCG CAATCGCACC CATTGCATCG AACGGACCTG CTGCCGCCAA GGCTGCGGGT
CCGTCCGCTA CTCCTGCTTC TCCTCTCTCC TCGGCGATGG CCAAGCACCG CCAGGAGCTG
GGCACGCTCG CCACCACGCT CCCGTTCTTC GCCTACACCG CCTGCTTCCT GCTCGCACCC
ACCGTCATCG TGATTGTCGG TGCATTCCAG GATCGCAGCG GCAACTTCAC GCTCGCGAAC
TTCAATAAGA TGTTCGAGGC CAACACCATC GCCGCATTCG GCACCTCGAT TCTGGTGTCT
TTAGCATCCT CTCTGATCGG CGCAGTGGTG GGCGCGCTCG CTTCCTACGC ACTGGTCATT
GGTGCCAAGC CGAACGGCCT GCTGCGTCGT ATGGTCTCCG CCATCTCCTC CGTGCTTGCT
CAGTTCGGCG GCGTGATGCT CGCGTTCGCG TTCATCGCCA CCATCGGCAT CAACGGTATC
GGCACCATGC TTATCAAGAC ACTGACCGGC TACACCGTGA ACCCGAACTG GCTCAGTTCG
TTGCCGGGCC TGGTGACCAT CTACTGCTAC TTCCAGATTC CGCTGATGAT CATCATCTTC
CTGCCCGCGG TCGATTCGAT CCGTCCACAG TGGCGCGAGG CATGCGAATC CCTCGGTGGC
AACACGTTCC AGTACTGGAC GCGCGTGGCC TGCCCGATTC TGGCACCCCG CTTCATCTCC
GCGTTCCTGC TGCTGTTCGC CTCCGCGTTC TCCGCATACG CGACCGCCGC GGCCCTGTTC
TCCCAGCGTT CGATTCTGGT GCCGCTTATG ATCCAAGGTG CCATGCGCAA CGAACTGGAC
CCCAACCAGC AGGGCTTTGC CCAGGTGCTG GCATTCGCAA TGATCATCGT CGTGGCCATC
GTCATGCTGT TGAGCCACGC CGTGGAAAAG AGGGCCGGAC GTTGGCAATG A
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| Protein sequence | MTAAIAPIAS NGPAAAKAAG PSATPASPLS SAMAKHRQEL GTLATTLPFF AYTACFLLAP
TVIVIVGAFQ DRSGNFTLAN FNKMFEANTI AAFGTSILVS LASSLIGAVV GALASYALVI
GAKPNGLLRR MVSAISSVLA QFGGVMLAFA FIATIGINGI GTMLIKTLTG YTVNPNWLSS
LPGLVTIYCY FQIPLMIIIF LPAVDSIRPQ WREACESLGG NTFQYWTRVA CPILAPRFIS
AFLLLFASAF SAYATAAALF SQRSILVPLM IQGAMRNELD PNQQGFAQVL AFAMIIVVAI
VMLLSHAVEK RAGRWQ
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