| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1087 |
|---|
| Symbol | recG |
|---|
| ID | 6364609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1276430 |
|---|
| End bp | 1279261 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642680258 |
|---|
| Product | RecG-like helicase |
|---|
| Protein accession | YP_001955031 |
|---|
| Protein GI | 189439950 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCA CTCTCGCTTC GCTGGTCACC AACAAGCGTC GCGTGTCCGC GCTCAAATCG
CTGGGAATCG TCACTGTCGG CGACGCCCTG ACCTACTATC CTTTCCGCGT CACCGAACCG
GTGCCGCTTC GCGCCATCCG CGAGGCCGCA CCCGGCCAGC AGATGGCATT TGCCGCCGTG
ATACGAGATA TGCGCGTGGT GCCGATGAAC GCTCGCCGCG GCTACCGACT CGAAGCGACG
GTCGATGACG CCGACTTCGC CCGGTCTCGT CGCGTACCCG GCAGTACGGC CCGGCTCACG
TTCTTCTCGT ATCGTAAATC GTATGTGGAT TGGGTCAGCG TGCGACTGCG CGCCGGCACG
TCTGTGGTGG TCTCCGGTAT GCCCGGCGAA TACATGGGTC AGCTGCAGTT CACCCATCCC
GAAATCCTCA CTGTCGCGCC CGTGCCGGCC GGAGCAGGAG CGGGGCTTGA GGGTTACGCT
CGGGGCGCGG CATCCGGCAA TGGTGCGTTT GCGGGAAGTG CCGATCCGTA TGCCAGTGCG
CAGTCCGCGT ATCCGCCGGC CGCGACTGCC CCTTCCGGGG CCGCGTTGAA ATACGACGCC
GATACCGTGC AAGAGGCGCT TACCCGCGTC TGCCGGCCCC GCCCGGTATA TCACGCCAGT
TCGCGTATCT CGTCCGAACA TATTCATGAG ACGATTCTGG GATTGCTGTG GATGATGGGG
GCCCGCACGT CATCCACGCC TGACGGGCAA CTCGCTGGCG CTGGGGCAGC CGGCATTGTG
GCTCCCGCGA CTGACACCAT CGCCGTCCAA AACGGGGAAG AGAAGTCCGG CACGACCGCC
GAATCCGGTG CTGAGGCGCT CTCCCAATCC ATCCCAGATG TGCTGCCCGA ATCGGTGCGC
AAGGCCAAGA ACCTCATGCA TCGGGCTGAG GCGTTCCTGG CCATTCATGA TCCGGCCTCC
ACGGCCCGGT TCAAGGAGGC CATCGAAACC CTGCGCTATG AGGAGGCTTT CGTTTCGCAG
ACCTCGCTGC TGAAGTCTCG ACAGCACGCG CACAAGTCAT CGGCGCATCC TTGCCCGCTG
AACGAGGCGC TGGAAACAGC TCGAGCGTCG GTGGGCGAAG CGGTTGCGGA GCCAAGTACG
CAACCAGAAG CATCGGAGCG CGGTTCTGCG ACCGATCTGC CTGATCTGCC CAATTTGCCC
AATTTGCGCG ACCGCTTCAT CGCATCGTTG CCGTTCACAC TGACAGCCGG GCAGAGTCAG
GTGGTGGACG ACATCGCGTC CGATCTTGAA CGTGACTGGC CCATGCAGCG TCTGTTGCAG
GGCGAAGTCG GCTCCGGCAA AACCGTAGTG GCGCTCGCGG CCATGCTGCA GGCGGTCGGC
GCCGGCTATC AGGCGGTGCT GGTGGCTCCC ACTCAGGTGC TTGCCGAACA GCATTACGAG
ACCATCAGCA AGATGGTGTC GGGGTTGACC CTTGCACAGC CGGGTGCCAA GGAGACCGAT
GCCGCGGCCG ACGTTGAGGG CGCGATGGGC GCGTCCGGTG CTTCGACGGT CTCTTCTTCC
AAGGTGACTG CGGAAATTCC CGTCACCCTG CTGACCGGTG GTATGAAGCT TGCCGCCCGG
CGTAAGGCGC TCGCTGCGGC CGCCAGTGGT GAGCCGGGCA TTATCGTGGC CACGCACGCG
GCGTTTTCCA AGACCTTCCA AGCCCCGCAC TTGGCCTTGG TGGTGATCGA CGAGCAACAC
CGGTTCGGTG TGGAACAGCG CGAAAGCCTC AACGCCAAAA CCGATGACGG CACCACGCCG
CATCTACTGG TGATGACCGC CACGCCCATC CCGCGCACCG CCGCCATGAC TTGGTTTGGC
GATCTCGATA TTTCCTGGCT CACCGAATTG CCTGGCGGCC GCAAACCGAT TCGTACCGTG
GTGGTCAATG AGGCCGACGC CGCCACCATG GGGCGTATGT TCGCGCACAT TCGCGCGCGA
GTCGACGCGG GGGAGCGGGC CTATATCGTG TGCCCGCGCA TTGATGCGGA TGATGAGGAG
AACGAAGGCG GTTCCGGCGT TTTGGCAGCA GCCGGTTCTG CCCGCGGACG CGTCGCAGCA
TCTGGTTCCA GTGCCCGCAC AGCTGCGGGC GGCCGTGCAA CGCGCGCGGC GGCCGATGCC
ATCGGCATCG ACGACCCCTA CGAAACCTTC GACGAAAATG GCGAAACCGT GGCTCGCCCG
CCATTGCATG CGGTGGCCGA AATCGCCGAC CGGTTGCAGA AACTTCCACA GTTCCAAGGC
ATTCGGTTTG CGACTCTGAC CGGCCGCGAC AAGGATGACG TCAAAACCCA GGTCATGGCC
GATTTTGCCG GCGGCGAGAC TCCGATCCTG GTGTCCACCA CGGTGATCGA AGTCGGCGTG
GACGTCAAGC AGGCCAGCTG CATCGTCATC TTTGATGCCG ACCGATACGG CCTCTCTCAG
CTGCATCAGC TGCGCGGCCG CGTGGGGCGT GGCGGCACCA ACTCGTGGGC GTTCCTTATT
TCCCGTGCGG AACCCGGCTC CCCGGCCGAG CAACGGCTCG AAGTGATTCA CCACTCGCTC
GACGGTGCCG AAATCGCCCA AGCCGACTTG GAATTCCGCG GTGCCGGCGA TGTGCTCGGC
GACGCCCAAT CCGGCGGCAA GTCCAGCCTG AAGCTCCTGC GCGTGGTCAA GGACGCCGAC
ATGATCGCCG ACGCCCGCAC CCGTGCCGGG CAGCTTCTGG CCGCCGACCC CGAACTGGCA
GGTGAGGTCC AACTCGCCGG TGCCGTCCTC GACTTCACCC GAGGCAACGA AACCTTCCTG
ACCTCCAGCT GA
|
|---|
| Protein sequence | MGTTLASLVT NKRRVSALKS LGIVTVGDAL TYYPFRVTEP VPLRAIREAA PGQQMAFAAV
IRDMRVVPMN ARRGYRLEAT VDDADFARSR RVPGSTARLT FFSYRKSYVD WVSVRLRAGT
SVVVSGMPGE YMGQLQFTHP EILTVAPVPA GAGAGLEGYA RGAASGNGAF AGSADPYASA
QSAYPPAATA PSGAALKYDA DTVQEALTRV CRPRPVYHAS SRISSEHIHE TILGLLWMMG
ARTSSTPDGQ LAGAGAAGIV APATDTIAVQ NGEEKSGTTA ESGAEALSQS IPDVLPESVR
KAKNLMHRAE AFLAIHDPAS TARFKEAIET LRYEEAFVSQ TSLLKSRQHA HKSSAHPCPL
NEALETARAS VGEAVAEPST QPEASERGSA TDLPDLPNLP NLRDRFIASL PFTLTAGQSQ
VVDDIASDLE RDWPMQRLLQ GEVGSGKTVV ALAAMLQAVG AGYQAVLVAP TQVLAEQHYE
TISKMVSGLT LAQPGAKETD AAADVEGAMG ASGASTVSSS KVTAEIPVTL LTGGMKLAAR
RKALAAAASG EPGIIVATHA AFSKTFQAPH LALVVIDEQH RFGVEQRESL NAKTDDGTTP
HLLVMTATPI PRTAAMTWFG DLDISWLTEL PGGRKPIRTV VVNEADAATM GRMFAHIRAR
VDAGERAYIV CPRIDADDEE NEGGSGVLAA AGSARGRVAA SGSSARTAAG GRATRAAADA
IGIDDPYETF DENGETVARP PLHAVAEIAD RLQKLPQFQG IRFATLTGRD KDDVKTQVMA
DFAGGETPIL VSTTVIEVGV DVKQASCIVI FDADRYGLSQ LHQLRGRVGR GGTNSWAFLI
SRAEPGSPAE QRLEVIHHSL DGAEIAQADL EFRGAGDVLG DAQSGGKSSL KLLRVVKDAD
MIADARTRAG QLLAADPELA GEVQLAGAVL DFTRGNETFL TSS
|
|---|
| |