| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1026 |
|---|
| Symbol | |
|---|
| ID | 6363317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1210536 |
|---|
| End bp | 1211537 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642680196 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_001954970 |
|---|
| Protein GI | 189439889 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA TTCTTACGCC GGTTGGCCTG TTGCTGATCA TTCTCACCGG CTATCTGTTC
AAGCGGTTCG GCCTATTCGG GCAGAAGGAT TATCGTGTGT TGCAAACCGC GGAATTCAAC
ATCGTGCTGC CCGGTGCCAT CGTATACTCG TTCGCCACCA ATTCGCATGA CATCTCGCTG
CTGCTTATTT CGGTATTCGC ATTCCTGTTT GCTTTTATCC CGGTCGTGTT CATCTTTCTG
GCCACCCGCA AGCGCAATGT GACCGACCGC GCCTTCCTGA TGCTCAACGG TGCCGGCTTC
AATCTCGGCT GTTTTTCTTT CCCGGTCGTC CAGTCATTCT GGGGTGCGGG CGCGGTGGTG
CCGGCTGCGA TGTTCGATAT CGGCAACTGC GTGATGGTGG CCGCCGGCAC CAATGTGCTC
ACCCAGCAAC TGCTGCATAT TCAGCCCGGC AAAACACTTG CCGAACAACA CGCCGGTTCG
GCTCCCACCC TACCGTACGA AAAGCCCAAG GATCGCGACG CCAAACGGCT TGCCCACCGC
GCATTGCTGC GCACCATCGG CAAGAGCTTC TTCGGCTCGG TGCCGTTCGA CACGTATCTG
CTCATGATCG TGTTGACCGT CGCCAACGTG AAGATTCCCG ATTGGATCGC CTCTATAACC
CAGCCATTGA GCGGCGCCAA CGCGCTGGTG TCGATGCTGA TGGTGGGCAT GCTCATGGAC
CTGCCCCAAT CCAAGCATGA CGTGAAGGAA GTCATGGCCG TCATCGCTTG GCGTATACCG
TTCAGCGTCG CCTTCGCGTT GATCGCGTGG TTCCTGCTGC CGTTCTCGGC TTCGATTCGC
GCCGTGATGG TGATCTGCGC GTTGGCTCCG ATCGCCATTT TCTCCACGCT GTTCACCGAC
AAAGTACTCG GCAACGCCAA ACTGGCCGGC TTCTCGCTGG CAATCACCGC GATGATTTCA
CTGGGGATGA TGGCTGTGGC TCACGCGCTG ATGGGCGTGT GA
|
|---|
| Protein sequence | MSAILTPVGL LLIILTGYLF KRFGLFGQKD YRVLQTAEFN IVLPGAIVYS FATNSHDISL
LLISVFAFLF AFIPVVFIFL ATRKRNVTDR AFLMLNGAGF NLGCFSFPVV QSFWGAGAVV
PAAMFDIGNC VMVAAGTNVL TQQLLHIQPG KTLAEQHAGS APTLPYEKPK DRDAKRLAHR
ALLRTIGKSF FGSVPFDTYL LMIVLTVANV KIPDWIASIT QPLSGANALV SMLMVGMLMD
LPQSKHDVKE VMAVIAWRIP FSVAFALIAW FLLPFSASIR AVMVICALAP IAIFSTLFTD
KVLGNAKLAG FSLAITAMIS LGMMAVAHAL MGV
|
|---|
| |