Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0936 |
Symbol | hisJ5 |
ID | 6363070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1078381 |
End bp | 1079322 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642680104 |
Product | amino acid ABC transporter/signal transduction systems periplasmic protein |
Protein accession | YP_001954880 |
Protein GI | 189439799 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.019687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTCCA CCAAACTGAA GTCCATTATG GCCATTGCAC TGAGCTCGGC CATGCTGTTC GCCACCGCCG CTTGCGGCAC CTCCGACAAG GCCGATGCCG GCACGGATTC CGCCAAGGGC TCCGATGCCG CCACCATCAC CAGCTACGAT GTCAGCTCCG TGGAGAAGGA TGACACCATC GCCGCACTGC TGCCTGAATC CGTGACCAAG GACGGCAAGC TCACCATCGG CACCAACCCC TCCTACGCCC CGGCCGAATT CCTCGACGCC GACGGCAAGA CCCAGATCGG CTACGACATG GATCTTGCCC GCGCCATGGG CAACATCTTC GGTCTCGATA CCGAAATCGT CTCCTCCAAC TTCGATACGA TCATTCCGGC CATCGGCTCC AAGTACGATC TGGGCATCGC CGCCTTCACC ATCACCAAGG AGCGCATGGA ATCCGTCGAC TTCGTCTCCT ACTTCACCGC AGGCATGGGC TATGCAGTGG CCGCAGGCAA CCCCAAGAAC GTCGATGAGA ACGACCTGTG CGGTCTGAAC GTTGCCGTCG AGACCGGCAC CGTCGAGGAA GAGGCCATCA ACAAGACCGC CAAGCAGTGC AAGGCGGACG GCAAGAAAGA CATCACCATC CAGTCCTCCA AGCAGCAGAC CGACGCCACC ACCGCTGTGG TGACCGGCAA GGCCGACGTC TTCTTCGCCG ATTCCCCGGT TGTCGGCTAC GCCATTGCCC AGACCGATGG TCAGCTGGAA CAGCTCGGCA AGGACTTCGA TGAAGTGCCG AACGCCATCG CCATCAAAAA GGGCGATTCC CAGACCACCG AAGCCGTGCA GAAGGCCATG CAAAAGCTTA TGGACGACGG CACCTACACC AAGATCCTCC AGCACTGGGG CGTCGAATCC GGCGCACTGG ACAAGGCCGA AATCAACCCG GCCGTCGAAT AG
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Protein sequence | MQSTKLKSIM AIALSSAMLF ATAACGTSDK ADAGTDSAKG SDAATITSYD VSSVEKDDTI AALLPESVTK DGKLTIGTNP SYAPAEFLDA DGKTQIGYDM DLARAMGNIF GLDTEIVSSN FDTIIPAIGS KYDLGIAAFT ITKERMESVD FVSYFTAGMG YAVAAGNPKN VDENDLCGLN VAVETGTVEE EAINKTAKQC KADGKKDITI QSSKQQTDAT TAVVTGKADV FFADSPVVGY AIAQTDGQLE QLGKDFDEVP NAIAIKKGDS QTTEAVQKAM QKLMDDGTYT KILQHWGVES GALDKAEINP AVE
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