| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0592 |
|---|
| Symbol | acsA1 |
|---|
| ID | 6362759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 677059 |
|---|
| End bp | 679092 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642679749 |
|---|
| Product | long-chain acyl-CoA synthetase |
|---|
| Protein accession | YP_001954536 |
|---|
| Protein GI | 189439455 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGGTTA TCAATTCCTT CACGCAGCAC ACGATCAATC TCACCCGTAA GGCGCTCAGG
TTGGGATCCG ACTTCGTCCA CCCGGTCCAC GACGACACCC CGGACGAGCC CGATTACCTG
TCCAACGCCG ACGTGCCGGT CGAGACCAAT ATCGCTTTGC CTCACAGCGA CGATTGGGAC
GACGGCCACC TGACCGTCAC CGACATCGAC CCCGCCACCG GCCTGCTCAC CACCTCCACC
GAAGGCAATC CGCCGCTGGA CGAAGGTACG TCCATCTACG ACCTGTATGC GGACCGCGCC
GAACGTATGG GCGATGAGCC GCTGTACACC TACAAGTCCG GCAACGATTG GGTGACCGTC
ACCGCCAACG AGTTCCTGGC TGACGTGCGT GCCGTGGCCA AGGGCCTGAT TCATTACGGC
CTGAAGAAGG GCGATGCCGT GGCATTCATG TGCCGAACTT CCTACGACTG GGACCTGACC
GACGCGGCGA TCATGGCGTG CGGCGGCGTG CTCGCCACCA TCTACGACAC CGATTCCGCC
GAGCAGATTC GCAATATCGT CAACAACTCC GATGCCCGAC TGCTGATCGT GCAGGACACG
GACATGCGTA AGAAGGCGGA TGGGGCCGTC GAAGAGTGCC CGTCCCTGGA GCACATCATC
ACCATCGAGA CCGGTGGCTT GGACGAGATC AAGGCCTACG GCACCACGGT CTCGGACGAG
GAGCTGGACG AGCGCATCGA TTCGGTCAAG AAGACCGACC TGTGTTCCAT CGTGTACACC
TCCGGTTCCA CGGCCGCGCC GAAAGGCGTG GAGATGACCC ACGAGCACTA CTGCCAGACC
GCGCTGAATC TGCCGGCCTA CATGCCCGAT CTGCTGCACG ACAAGAGGAA CACCATCCTG
CTGTTCCTGC CGCAGGCCCA TTCCTTCGCC CGCGCCATCA ACTACATCGT CGTCTCCTCG
AACGTCCGCA TCTACATCGC CACCGGCATC AAGACGCTGA TCAGCGATCT GCAGGTGGCC
AAGCCCACTC TCATGATCGT GGTGCCGCGC GTGCTGGAGA AGGTGTACAA CGCCGCGTCC
CAGAAGGCCG GCCACGGCCC CAAGGGCGTG GTGTTCGCCT CCGCCGTGGT GGCCGCGCAG
AACTATATGA AGGAGGTCTC CGCCAATGGC AAGGCAGGTG CACTGACCCG CACTCGCCGC
GCTGCCTTCG ATCCGATTGT CTACTCTTCG CTGCGCGAAG TGCTCGGCGG TCGCGCCAAG
TGGATTGTGG CCGGCGGTGC CCCGCTTGAC CCGGAACTGC TGGCTTTCTT CCGTGGCGCG
GGTGTGCCTG TATACGAGGG CTATGGTCTG ACCGAGACCA CCGCACCGTG CGCGTTCAGC
CCGCTGGGTA CGCCGTTCCA CGCTGGTTCC GTGGGCATCG CATTCCCCGG ATTCTCCCTG
CGCATCGCCG AGGACGGCGA AATTCAGGTC AAGGGTCGTG CCGTGTTCCC GCGCTATCAC
AAGAACGACG AGGCCACTGA GCTGTCGTTC ACCGAAGATG GCTGGTATGT CACCGGCGAC
TTGGGCCGTA TCGACAACGA TGGCTTCCTG TACATCACCG GTCGTAAGAA GGATCTGATT
ATCACTGCAG GTGGTAAGAA CGTCTCCCCC GGCCCGATCG AGGAAGTCAT TCAGCGTTGC
GAGTTCGTCT CCCAGGCGCT GGTGCTGGGT GATAAGCGTC CGTTCATCTC CGCATTGGTG
ACGCTGGACG AGGAGTCGCT GCGCCCGTGG CTGGCCGCCA AGGGCCTGGA CGAGAACATG
CCGCTGGAGG ATGCCGCCAA GAACGCCGCC GTGCGCGCCG AAGTGCAGAA GTGGGTCGAT
CAGGCCAACG AGGGCGTCTC CCGCGCCGAG TCCGTGCGCA AGTTCATCAT CCTGCCCGAG
GAGTTCACTC AGGAAAACGG CCTGATGACC GCTTCCATGA AGGTGATTCG TCCCAAGGTC
ATCAAGCGCT ACTCCACCCT CCTCAACACC CAGATGTACA CGAAGCGGAA GTAA
|
|---|
| Protein sequence | MSVINSFTQH TINLTRKALR LGSDFVHPVH DDTPDEPDYL SNADVPVETN IALPHSDDWD
DGHLTVTDID PATGLLTTST EGNPPLDEGT SIYDLYADRA ERMGDEPLYT YKSGNDWVTV
TANEFLADVR AVAKGLIHYG LKKGDAVAFM CRTSYDWDLT DAAIMACGGV LATIYDTDSA
EQIRNIVNNS DARLLIVQDT DMRKKADGAV EECPSLEHII TIETGGLDEI KAYGTTVSDE
ELDERIDSVK KTDLCSIVYT SGSTAAPKGV EMTHEHYCQT ALNLPAYMPD LLHDKRNTIL
LFLPQAHSFA RAINYIVVSS NVRIYIATGI KTLISDLQVA KPTLMIVVPR VLEKVYNAAS
QKAGHGPKGV VFASAVVAAQ NYMKEVSANG KAGALTRTRR AAFDPIVYSS LREVLGGRAK
WIVAGGAPLD PELLAFFRGA GVPVYEGYGL TETTAPCAFS PLGTPFHAGS VGIAFPGFSL
RIAEDGEIQV KGRAVFPRYH KNDEATELSF TEDGWYVTGD LGRIDNDGFL YITGRKKDLI
ITAGGKNVSP GPIEEVIQRC EFVSQALVLG DKRPFISALV TLDEESLRPW LAAKGLDENM
PLEDAAKNAA VRAEVQKWVD QANEGVSRAE SVRKFIILPE EFTQENGLMT ASMKVIRPKV
IKRYSTLLNT QMYTKRK
|
|---|
| |