| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0251 |
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| Symbol | xerC |
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| ID | 6364655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 314985 |
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| End bp | 316052 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679398 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001954195 |
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| Protein GI | 189439114 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00631913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCATCTA CGCAGTTCGA CGGCGATATC GACTCCTTCG TCTCCTATCT GAAGTCCAAC
CGCGGCCTGT CAGCGAATAC GCTCAAAGCG TATCGCGCGG ATCTCACGGC ATGCCTGCAC
CTGTTCGAGC TGCGCGGCGT GACCGATCTG AACGAGATCA CGCTGGATGA TCTGCGCAGC
TGGATGGCGG TGGAATCGCG CGATCACGCC CGCAGCAGCA TGGCCCGCAA AACCGTGGCC
GTGCGCGGGT TCTTCGCGTG GGCCTATGAG CATGGGCTGA CCACCACCGA CCCGGCCGCC
ACACTGATGA CTCCCTCGAT TCCCAGCACG CTGCCCGCGG TGCTCACCGA ATCCCAGGCC
GAGCAATTAT TGGATGTCGC TGAACATGCC GTTGCAACAA ACCAGTACAA GGACGATGGG
GGAGCGGCAG CCGCGCCCGG CAGCGGCAAG GCAGCTGGCA AGACAGCTGA TAAGTCGGCC
GATACCGTAA ACCGCAGTGA GGCACCCGCC CGTGCAGACA AGCGCGACAA CGCCCGAGTC
ACCGCCGAAT CGCAGCGCAA CGCCGCGATT CTCGAACTGC TGTATGCCAC CGGCATCCGT
GTCGCCGAAC TGGTGTCGAT GGATATCGCC GACATCGACT TCTCCAATCG CACCATCAAA
GTCACCGGCA AAGGCAACAA GCAACGCGTG GTGCCGTTCG GACTACCCGC CCAGCGTGCG
CTGGAGACTT GGCTGGAACA GGGGCGGCCG GTACTGGCCC GTACGGCAAC GGATGCAGTC
AAGTCCCGTG CTGCCAACGC CCTGTTCCTC GGCGCACGAG GCGGCCGTAT CGACCAACGC
ATAGCCCGTG ACATCGTGCA CAGAGCGGCC CGAGAGGCCG GAGTGCCGGA TATCAGTCCC
CACGCCTTGC GGCATTCCGC GGCCACGCAC ATGCTGGATG GCGGCGCCGA TTTGAGGGAG
GTGCAGGAGA TGCTCGGGCA TTCCTCCTTG AAAACTACAC AACGCTATAC GCACGTCTCC
ATCGAGCAGC TCAAGAACCG TTACGGACAG GCCTTTCCCC GGGCATGA
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| Protein sequence | MSSTQFDGDI DSFVSYLKSN RGLSANTLKA YRADLTACLH LFELRGVTDL NEITLDDLRS
WMAVESRDHA RSSMARKTVA VRGFFAWAYE HGLTTTDPAA TLMTPSIPST LPAVLTESQA
EQLLDVAEHA VATNQYKDDG GAAAAPGSGK AAGKTADKSA DTVNRSEAPA RADKRDNARV
TAESQRNAAI LELLYATGIR VAELVSMDIA DIDFSNRTIK VTGKGNKQRV VPFGLPAQRA
LETWLEQGRP VLARTATDAV KSRAANALFL GARGGRIDQR IARDIVHRAA REAGVPDISP
HALRHSAATH MLDGGADLRE VQEMLGHSSL KTTQRYTHVS IEQLKNRYGQ AFPRA
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