| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0124 |
|---|
| Symbol | lacY |
|---|
| ID | 6362718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 146898 |
|---|
| End bp | 148235 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642679264 |
|---|
| Product | galactoside permease |
|---|
| Protein accession | YP_001954068 |
|---|
| Protein GI | 189438987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000688669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTG CAACCAAATC TGCATGGAAG AATCCTTCCT ATCTGCAGAG CTCTTTCGGC
ATCTTCATGT TCTTCTGCTC CTGGGGCATC TGGTGGTCCT TCTTCCAGCG CTGGCTCATC
TCAGGCGTTG GATTGACCAA TGCTGAAGTC GGCACCATCT ACTCCATCAA CTCGCTGGCC
ACCCTGGTCA TCATGTTTGT GTACGGCGTG ATTCAGGATC AGCTCGGCAT CAAGCGCAAG
CTCGTCATCG TAGTCTCGGT AATCGCCGCC TGCGTTGGCC CATTCGTCCA ATTCGTTTAC
GCCCCGATGA TCCTCGCCGG TGGCACCACC CGCTGGATCG GCGCACTCAT CGGCTCCATC
GTTCTGTCTG CCGGCTTCAT GTCCGGCTGC TCCCTGTTCG AGGCCGTCAC CGAACGCTAC
TCCCGTAAAT TCGGTTTCGA ATATGGCCAG TCCCGTGCTT GGGGCTCCTT CGGTTACGCC
ATCGTGGCGC TGTGCGCCGG CTTCCTGTTC AACATCAACC CGCTGATCAA CTTCTGGGTC
GGCTCCGCAT TCGGCCTTGG CATGCTCCTC GTGTACGCCT TCTGGGTCCC GGCCGAGCAG
AAGGAAGAGC TCAAGAAGGA AACCGACCCG AACGCAGCCC CCACCAACCC GTCCCTCAAG
GAAATGGTCG CCGTTCTCAA GATGCCGACC CTGTGGGTGC TCATCGTCTT CATGCTGCTG
ACCAACACCT TCTACACCGT GTTCGATCAG CAGATGTTCC CGACCTACTA CGCCAACCTC
TTCCCCACTG AAGAAATCGG CAACGCCACC TACGGCACCC TGAACGGTTT CCAGGTCTTC
CTTGAGTCCG CAATGATGGG CGTGGTCCCG ATCATCATGA AGAAGATCGG CGTGCGCAAC
GCTCTGCTGC TCGGCGCTAC CGTGATGTTC CTGCGCATCG GCTTGTGCGG CGTGTTCCAC
GACCCGATCA CCGTCTCCAT CGTCAAGCTG TTCCACTCCA TCGAAGTGCC GCTGTTCTGC
CTGCCGGCAT TCCGCTACTT CACTCTGCAC TTCGACACCA AGCTCTCTGC CACGCTGTAC
ATGGTGGGCT TCCAGATCGC TTCCCAAGTG GGTCAGGTCA TCTTCTCGAC CCCTCTGGGT
GCCTTCCACG ACAAGATGGC TCAGATTCTG CCGAACAACG ACATGGGATC CCGCGTGACC
TTCTGGGTCA TCTCTGCCAT CGTGCTGTGC GCACTGATTT ACGGCTTCTT CGTCATCAAG
CATGATGATC AGGAAGTCGG CGGCGACCCG TTCTACACCG ACAAGCAGCT GCGTCAGATG
GAAGCGGCCA AGGCCTGA
|
|---|
| Protein sequence | MASATKSAWK NPSYLQSSFG IFMFFCSWGI WWSFFQRWLI SGVGLTNAEV GTIYSINSLA
TLVIMFVYGV IQDQLGIKRK LVIVVSVIAA CVGPFVQFVY APMILAGGTT RWIGALIGSI
VLSAGFMSGC SLFEAVTERY SRKFGFEYGQ SRAWGSFGYA IVALCAGFLF NINPLINFWV
GSAFGLGMLL VYAFWVPAEQ KEELKKETDP NAAPTNPSLK EMVAVLKMPT LWVLIVFMLL
TNTFYTVFDQ QMFPTYYANL FPTEEIGNAT YGTLNGFQVF LESAMMGVVP IIMKKIGVRN
ALLLGATVMF LRIGLCGVFH DPITVSIVKL FHSIEVPLFC LPAFRYFTLH FDTKLSATLY
MVGFQIASQV GQVIFSTPLG AFHDKMAQIL PNNDMGSRVT FWVISAIVLC ALIYGFFVIK
HDDQEVGGDP FYTDKQLRQM EAAKA
|
|---|
| |