| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0020 |
|---|
| Symbol | hisP1 |
|---|
| ID | 6364382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 26215 |
|---|
| End bp | 26985 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642679159 |
|---|
| Product | amino acid ABC transporter ATPase |
|---|
| Protein accession | YP_001953964 |
|---|
| Protein GI | 189438883 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.732673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCCCGC TGGTTCCCGG CAAAGAGGAC CCGAACCGTC CGCTAGTCGA ACTGACCCAC
GTCGAAAAGC ACTTCGGTGC TTTGCACGTC CTCAAGGACA TCAACCTGAC CGTCACCAAG
GGTGAGGTGC TGGTGGTCGT GGGCCCGTCC GGCTCAGGCA AGTCCACGAT GTGCCGCACC
ATCAATCGCC TCGAGACCAT CGATTCCGGC GACATCCGCA TCGACGGCAA GCCCCTGCCA
CAGGAAGGCA AGGAGCTCGC GAACCTCAGG GCCGAAGTTG GCATGGTATT CCAGTCGTTC
AACCTGTTCG CCAACAAAAC CATTCTTGAA AACGTGACGT TGGCCCTCAT CAAGGTGCGT
CACATGGACA AGAAGGAAGC CGAGCAACTG GCCATGGACC TGCTCGCCCG CGTGGGCGTC
GACTCCCAAG CCAGCAAGAT GCCCTCCCAG CTCTCCGGCG GCCAGCAGCA GCGTGTGGCC
ATCGCCCGCG CGCTCGCCAT GCGCCCCAAG GTCATGCTGT TCGACGAGCC CACCTCCGCA
CTCGACCCGG AAATGGTCAA CGAAGTGCTC GACGTGATGG TCGAACTCGC GCATGAAGGC
ATGACGATGA TCTGCGTGAC CCACGAGATG GGTTTCGCGC GCAAGGCCGC CGACCGCATC
GTCTTCATGT CGGACGGCCA GATTCTCGAA GAGAACACGC CCGACGAGTT CTTCGAGCAT
CCGCAGACCG ACCGTGCCAA GGACTTCCTC TCGAAGATCC TCACCCACTG A
|
|---|
| Protein sequence | MTPLVPGKED PNRPLVELTH VEKHFGALHV LKDINLTVTK GEVLVVVGPS GSGKSTMCRT
INRLETIDSG DIRIDGKPLP QEGKELANLR AEVGMVFQSF NLFANKTILE NVTLALIKVR
HMDKKEAEQL AMDLLARVGV DSQASKMPSQ LSGGQQQRVA IARALAMRPK VMLFDEPTSA
LDPEMVNEVL DVMVELAHEG MTMICVTHEM GFARKAADRI VFMSDGQILE ENTPDEFFEH
PQTDRAKDFL SKILTH
|
|---|
| |