| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK2559 |
|---|
| Symbol | prdF |
|---|
| ID | 3023594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 2682395 |
|---|
| End bp | 2683432 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637546782 |
|---|
| Product | proline racemase |
|---|
| Protein accession | YP_084148 |
|---|
| Protein GI | 52142682 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.659192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTCAC AAAGAGTCTT TACGACGATT GATACACATA CGGGTGGGAA TCCAACGAGA
ACATTGATTA GCGGACTACC TAAGTTACTT GGAGAGACGA TGGCAGAGAA AATGTTACAT
ATGAAAAAGG AGTATGACTG GATTCGCAAA TTGTTAATGA ATGAACCGCG TGGTCATGAT
GTAATGTCCG GAGCACTATT AACAGATCCA TGTCACCCTG ATGCCGATAT TGGTGTTATA
TACATAGAGA CAGGCGGATA TTTACCAATG TGTGGTCACG ATACAATTGG TGTATGTACA
GCTTTAATTG AATCAGGTTT AATTCCGGTA GTTGAACCGA TTACTTCGTT AAAGTTAGAT
ACGCCAGCTG GCTTAGTTGA AGTGGATATC TTTGTTCAAG ATGGAAAAGC GAAAGAAGTC
TCCTTTTGTA ACATACCAGC TTTTGTACTG AAACATATCA CGGTAGACGT CGAGAACATT
GGAACTGTAG CGGCTGATAT TGCGTATGGA GGGAACTTTT ATGCCATTAT CGATGCGAAA
TCAGTAGGGT TAGAGTTAGT ACCAGAAAAC GCATCTACAA TTATCGATAA AGCGATTCTC
ATAAGAAATA CAATTAATGA GAAATTTGAA ATCATACATC CAGAGCATTC GTTTATTAGA
GGATTAACCC ACGTGGAGTT TTATACAGAT CCTACCCATG AAAGTGCGCA TGTGAAAAAC
ACAGTTGTCG TTCCGCCTGG AGGAATTGAT CGATCTCCAT GTGGTACAGG AACATCAGCG
AAGTTAGCTG TATTATACGC AAACCAAAAA ATTGAAATGA ATGAAGAGTT TGTTCATGAG
AGTATTGTTG GTTCTTTATT TAAAGGGTGC GTTATAAATA CGACAAATGT TGCAAATATG
GAAGCTGTCG TAACGAAAAT TACAGGTTCA GCTTGGCTTA TGGGGATGCA TAGATTTTTT
TACAATGAAA AGGATCCACT GAAAGAAGGA TTTTTGCTAA TTCCGCCGAT GGAACATGAA
ACGGAGGATG TAAAATGA
|
|---|
| Protein sequence | MRSQRVFTTI DTHTGGNPTR TLISGLPKLL GETMAEKMLH MKKEYDWIRK LLMNEPRGHD
VMSGALLTDP CHPDADIGVI YIETGGYLPM CGHDTIGVCT ALIESGLIPV VEPITSLKLD
TPAGLVEVDI FVQDGKAKEV SFCNIPAFVL KHITVDVENI GTVAADIAYG GNFYAIIDAK
SVGLELVPEN ASTIIDKAIL IRNTINEKFE IIHPEHSFIR GLTHVEFYTD PTHESAHVKN
TVVVPPGGID RSPCGTGTSA KLAVLYANQK IEMNEEFVHE SIVGSLFKGC VINTTNVANM
EAVVTKITGS AWLMGMHRFF YNEKDPLKEG FLLIPPMEHE TEDVK
|
|---|
| |