| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK0412 |
|---|
| Symbol | pbpX |
|---|
| ID | 3026485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | + |
|---|
| Start bp | 477227 |
|---|
| End bp | 478495 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637544612 |
|---|
| Product | beta-lactamase (penicillin-binding protein) (penicillinase) |
|---|
| Protein accession | YP_082021 |
|---|
| Protein GI | 52144808 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTGAATA AGGGGAAAAA AGTAATCATG GATCACGAAA AAAATAATGC GAATGGGAAA
TCACGTCGGC CGATTGTATA CATAAAAAGA ACAATCATTC TCGTCTTACT ATTTTCACTT
GTATATTTTA TGTATACAAA AATTGTTGCG CATAATAAGA AAGAAGAAAC TTTAAAAGCA
GCAGCAGAAA TGAAGAAACA AGAAGAGCTA AAAAAGAAAG AAGAAAAAAA GAAGCAAGAA
GCAAAAAAAC AAATAGAGCA GGAAGAACAA GTGAAGCAAG CACAAGCTGC AGAACAGCCT
GCTGAGGGAC CACCTCAAGA AATTAATGAA AACGCTCAAT TAGATCAATA TTTACAAAAA
ACAGGATTTA GCGGGACAGC GGTTATTGTG AAGAACGGAA AAGTTCTTGT GAATAAAGGA
TATGGTATGG CGAATAAAGA GAAACAAGTA CCGAATAATT CAGAGACAAC TTTTTATATT
GGTTCTATTT CAAAGGCGTT TGTAGCAACT ACTATTATGC AATTAAAAGA TCAACATAAA
TTAAACGTAG AAGATACGGT TGCGAAATAT ATTCCAGATT TCCCTCAAGG TAATAGTATT
CAGTTAAAAC ATTTATTAAC ACATACATCA GGAATTCCGG AGTACGAGCA AGGAACAGAG
GATATTTCTC ATGAAGAATT GATAAAACGA ATAGGAAAGC AAAAGCGCAT TGGAAGCCCA
GGAGAGAAAT GGAAGTATTC CGATTCTAAC TATTCGATAC TTGCCTATAT TGCTGAGAAG
GTAAGCGGAC AACCGTTAGA AGAGTATATT AAACAACATA TTTTTGCACC TGCTGGTATG
AAACATTCTG GTTTTGGTAG AGAGCTAGAA CAAACAAGAT TTCCATCGAC AGGTTATAAA
ATAGTAAATA ACAATATGAC AACACCTAAT ATTCCAAGTA TGTCACAACT ATATGGTTGT
GGTGATATAT ATACAAGTGC ACATGATTTA TATTTATTTA ATGAAGCACT TTTCTCTGGA
AAGTTAATTT CAAAAGAAAG CTACGATCAA ATGTTTACAG GCGGAAAAAA AGATTACGGG
TTTGGATGGT ACGTAGACCC GGGAAGTTAT TCGAATCACG GTGTAATGCC AGGCTGGAAT
TGCTTGAATG GATTTAGTAA AAACGGAAGT GTGTATGTCG TTTTATTATC TAACATTCAA
AACAATATTA AATCGTTTGG TAAAGTGAAC AACGATATTT ATACGATGTT GCGAAATATT
GAAGTGTAA
|
|---|
| Protein sequence | MVNKGKKVIM DHEKNNANGK SRRPIVYIKR TIILVLLFSL VYFMYTKIVA HNKKEETLKA
AAEMKKQEEL KKKEEKKKQE AKKQIEQEEQ VKQAQAAEQP AEGPPQEINE NAQLDQYLQK
TGFSGTAVIV KNGKVLVNKG YGMANKEKQV PNNSETTFYI GSISKAFVAT TIMQLKDQHK
LNVEDTVAKY IPDFPQGNSI QLKHLLTHTS GIPEYEQGTE DISHEELIKR IGKQKRIGSP
GEKWKYSDSN YSILAYIAEK VSGQPLEEYI KQHIFAPAGM KHSGFGRELE QTRFPSTGYK
IVNNNMTTPN IPSMSQLYGC GDIYTSAHDL YLFNEALFSG KLISKESYDQ MFTGGKKDYG
FGWYVDPGSY SNHGVMPGWN CLNGFSKNGS VYVVLLSNIQ NNIKSFGKVN NDIYTMLRNI
EV
|
|---|
| |