Gene BCI_0442 details

Gene Information

• Locus tag: BCI_0442
• Symbol: sppA
• ID: 4056186
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
• Kingdom: Bacteria
• Replicon accession: NC_007984
• Strand: +
• Start bp: 456215
• End bp: 458071
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 637981794
• Product: protease 4
• Protein accession: YP_588883
• Protein GI: 94677025
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0616] Periplasmic serine proteases (ClpP class)
• TIGRFAM ID: [TIGR00705] signal peptide peptidase SppA, 67K type; [TIGR00706] signal peptide peptidase SppA, 36K type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.116179
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTTAT CCATGATAAC CTTATGGAAA ATAATAGTTA ACCCTTTGAT ATTTAGTTGG 
CGTTTACTTA TTTTTTTCCG TGAATTAATA GCAAATTTAT TTATATTACT ACTAATAGTA 
GTGATTGTTA ATATTTGCTT GCATATAACT AATACTACAC CTTCTTTCAT GAAGAAAGGT 
GCTTTAGTTA TGGATCTCAA AGGATTTATT GTAGATCAAT CTATAGAAAA GAAAAAGTTA 
CGATTATTTA ATCGTAATTT ACACAATGGA TCAAATTATA CTATACCAGA AAATTCTTTA 
TTTGATATAG TTAATATACT ACGTCAGGCT AAAAATAATA ACCATATTAC TGGTTTAGTA 
CTATTACTTA AAAATTTTTA CGGGGCGGAT CAACCTTCTT TACAGTATAT AGGTAAAGCA 
CTACATGAAT TCCGTAATAG CGGTAAACCT ATTTATGCTG TAGGTGATAA TTATAGTCAA 
GCACAATATT TTCTTGCTAG CTATGCTAAT AAAATTTACC TGTTACCACA GGGAGAAGTA 
GATTTACATG GTTTTGCCAC TAATAATTTA TATTATAAAT CTTTATTAGA TAAATTAAGA 
ATTAATAGCC ATGTTTTCCG TGTTGGTACC TATAAATCAG CAGCTGAACC TTTCTTACGT 
GATAATATGT CTAAAGCAGC CAGAGATGCA GATAGTCGTT GGACTAAACA GTTATGGCAA 
AACTATCTCA ATATAGTTGC TACTAATAGA AATTTAACAC CACAACAGTT ATTTCCTAAT 
TTATCTACTA TACTAAAAAA ATTTAGTGCA GTTAAAGGTG ATACGGCACA GTATGCATTA 
AAAAATAAAT GGGTAGATGA AGTTCTTTCA AGGTCCCAAA TTGATAATAT AATGATTAAA 
GCTTTTGGTT TTAATGATCA AAATAAATCA TTTAATAGCA TTAGTATTTA TGATTATCAT 
AAAATTTATC CTATACAGCA AAAAAATACA CTACATAGTG CACAAATAGC CGTTATTTTT 
GTAGATGGCA CTATTACTAA TGAACAAGAA AGACCAGGAT TAGTTAATTG TGATAAAATT 
GCATTTCAGA TACGTAATGC TTGCTTAGAT CCCAATGTTA AAGCTCTTAT TTTAAGAGTT 
AATAGCCCAG GAGGCAGTGT AAATGCATCC GAAATAATTC GTGCAGAGTT AGAAACTACG 
CGTAATGCTA ATAAACCAAT AGTAATCTCT ATGGGTGGTA TGGCAGCTTC TGGTGGTTAC 
TGGATTTCTA CTCCAGGAAA CATAATTATC GCTAGCCCTA GTACTATTAC TGGATCTATT 
GGTATTTTTG GTATAGTTCA TACAATAGAA AACTTGCTTG ATTACGTTGG TATACATGCT 
GATGGTGTTG CTACATCGCC AATAGCTGGA ACATCGATAA CTAAAAAATT ACCAGCTGAG 
TTATCAACAA TGATGCAATT GAATGTAGAG AATGGCTATA ATAACTTTGT TTCTTTAGTA 
GCACAGTCTC GTAATAAAAC TATAAGTGAA ATAGAAAAAA TTGCTCAGGG TCATATCTGG 
ATCGGTAGTG ATGCGCTCAA GAAAGGACTA GTAGATAAAC TAGGTGATTT TGATGATGCG 
GTAAGTCAAG CAGCTAAACT AGCGAATTTA AAACAGTATA AATTAAATTG GTATATTGAT 
GATGTTAATT TAATTAGTGC ATTACTTACA CAACTTAATG CTGTATTCTT ATCTATACTA 
CCTGTTCCTA TTATTAAAAT GGAAAATTTT ATTAATAATA CAATTAGTTT ATTCCCTTTA 
GATCAACAAA ATTGTTATGC ATTGTGTATG ACTTGTGAAC CAAATAAGTT AGACTAA 

 

Protein sequence

MYLSMITLWK IIVNPLIFSW RLLIFFRELI ANLFILLLIV VIVNICLHIT NTTPSFMKKG 
ALVMDLKGFI VDQSIEKKKL RLFNRNLHNG SNYTIPENSL FDIVNILRQA KNNNHITGLV 
LLLKNFYGAD QPSLQYIGKA LHEFRNSGKP IYAVGDNYSQ AQYFLASYAN KIYLLPQGEV 
DLHGFATNNL YYKSLLDKLR INSHVFRVGT YKSAAEPFLR DNMSKAARDA DSRWTKQLWQ 
NYLNIVATNR NLTPQQLFPN LSTILKKFSA VKGDTAQYAL KNKWVDEVLS RSQIDNIMIK 
AFGFNDQNKS FNSISIYDYH KIYPIQQKNT LHSAQIAVIF VDGTITNEQE RPGLVNCDKI 
AFQIRNACLD PNVKALILRV NSPGGSVNAS EIIRAELETT RNANKPIVIS MGGMAASGGY 
WISTPGNIII ASPSTITGSI GIFGIVHTIE NLLDYVGIHA DGVATSPIAG TSITKKLPAE 
LSTMMQLNVE NGYNNFVSLV AQSRNKTISE IEKIAQGHIW IGSDALKKGL VDKLGDFDDA 
VSQAAKLANL KQYKLNWYID DVNLISALLT QLNAVFLSIL PVPIIKMENF INNTISLFPL 
DQQNCYALCM TCEPNKLD