| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0367 |
|---|
| Symbol | cvpA |
|---|
| ID | 4056495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | + |
|---|
| Start bp | 374317 |
|---|
| End bp | 374802 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637981719 |
|---|
| Product | CvpA family protein |
|---|
| Protein accession | YP_588811 |
|---|
| Protein GI | 94676889 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.202665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGA TAGATTATCT TATAATTAGT ATTATTATGT TTTCAACACT ACTAAGTCTT
ATTCGTGGTT TTATTCAAGA ATCGTTATCA TTAATTAACT TAGCTTGTGC TTTTTTTGTT
TCTAGTAGTT ATTATCAAAC TATAGCAAAT TACTTAACTC AATTTGAAGA AGAGATAGTT
CGGAATAGTC TTGCTATTAC TATACTGTTT ATTATAACAA TGCTGATTGG AAAAATTATT
AATAACGTCG CTAGCTCATT AGTAGAACGA GCGGGCTTAG ACGGAACTGA TCGTGTATTA
GGCGCATGTT TTGGCTTACT ACGTGGCATA CTCATTATCT TAGTTATACT ATATCTATTC
GCCACTTTTA CTAATTGTCA ATATAGTAAA TATTGGCAAC AGTCCCTACT CATACCACAA
TTATGTTCCA TCATGAGATG GTTATTAAAT TATCTGCATA TAACAAACAG TAATATGTTG
ATCTAA
|
|---|
| Protein sequence | MSRIDYLIIS IIMFSTLLSL IRGFIQESLS LINLACAFFV SSSYYQTIAN YLTQFEEEIV
RNSLAITILF IITMLIGKII NNVASSLVER AGLDGTDRVL GACFGLLRGI LIILVILYLF
ATFTNCQYSK YWQQSLLIPQ LCSIMRWLLN YLHITNSNML I
|
|---|
| |