| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0149 |
|---|
| Symbol | gcvT |
|---|
| ID | 4056159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | - |
|---|
| Start bp | 164177 |
|---|
| End bp | 165154 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 637981505 |
|---|
| Product | putative global regulator |
|---|
| Protein accession | YP_588618 |
|---|
| Protein GI | 94676520 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
|---|
| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.423985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATATAA ATTTTAGCTA TCCATATATA ATACCATCAT CACATATTAA CTTATCATTA
ACTTTGATTT CATTAGAAGA ATGGGCATTA ATAACATTTA ATGGTAAAGA TGCTGTTAAG
TATCTACAAG ATCAACTAGC TTGTGATGTA ACATCATTAA AAAATAATGA GTATACTTTT
ACAGTACATT GTAATACAAA AGGAAAGGTA TACAGTAATG TATACTTTTT ACATTATCAA
GATGGATTTG CGTTAATTAC AAGAAAAAGT GTATATGCTA ATGAGTTAAA TATATTTAAA
AAATATGCAA TTTTTTATAC GGTAAATATT AATTTTCATC AGAATAAAAT ATTATTAGGT
ATAGCTGGTT TACAAGTAAA AGATATATTA AGTAATATAT TTACTACTAT ACCAAATAGA
TTATGTCCAG TAATTCATAC TATGGATACT ACTATTCTAT ATTTACATCA ACCAGCTGAT
CGTTTTTTGT TAATTACTAC AAATAATATA CAAAATCTAA TATTAAAAAA ACTTACTAAA
TATAAAATAC AAACAAACAA TAGTAAACAA TGGTTAGCAT TAGATATTGC TGCTGGATAT
CCTATTATTG ACCAAATAAA TAGTGAATTA TTATTACCAC AAGCATTAAA TATTGAAGCT
TTAGGAGGTA TTAGTTTTAA CAAAGGATGC TATTTAGGGC AAGAAGCAAT TGCTCGAACT
AAATATCATA ACATGAACAA AAAAGAATTA TGTTTTTTGT CAGGTAAAGC AAATCGAATT
CCAACAGCTA GTGAGAAACT AGAAATAAAA ATAAACAATA ATTGGCGTTA TACTGGAATA
GTATTAGCAG CTTGTAAATT AAAAAATAAT ATATGGATAC AAGTAGTGCT AAATAGAAAT
TTAGCTATAG ATAGTATTTT ACGTGTTCGA GGAGATATAA CAAGTGTCTT TCATTTATGT
CCGCTAAATT ATTTATAA
|
|---|
| Protein sequence | MHINFSYPYI IPSSHINLSL TLISLEEWAL ITFNGKDAVK YLQDQLACDV TSLKNNEYTF
TVHCNTKGKV YSNVYFLHYQ DGFALITRKS VYANELNIFK KYAIFYTVNI NFHQNKILLG
IAGLQVKDIL SNIFTTIPNR LCPVIHTMDT TILYLHQPAD RFLLITTNNI QNLILKKLTK
YKIQTNNSKQ WLALDIAAGY PIIDQINSEL LLPQALNIEA LGGISFNKGC YLGQEAIART
KYHNMNKKEL CFLSGKANRI PTASEKLEIK INNNWRYTGI VLAACKLKNN IWIQVVLNRN
LAIDSILRVR GDITSVFHLC PLNYL
|
|---|
| |