Gene BCE_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCE_1401 
SymbolpotD 
ID2748924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus ATCC 10987 
KingdomBacteria 
Replicon accessionNC_003909 
Strand
Start bp1403335 
End bp1404384 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content35% 
IMG OID637278226 
Productspermidine/putrescine ABC transporter, spermidine/putrescine-binding protein 
Protein accessionNP_977722 
Protein GI42780475 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA TGAAAAGATT AGCAGGTGCA GCAATTAGCT TTAGCCTTGT TGCTGGTGTA 
CTTGCTGGTT GTGGTGAAAA AAAAGAAGAG TTAAACATTT ATAGCTGGGC TGACAATTTT
GATGAGCAAG TGTTAAGAGA TTTTGAAAAG AAATATAACG TGAAAATTAA CTATGATAAG
TATGCAAGTA ATGAAGAAAT GCTTGCGAAA TTACAAGCAG GTGGCGCGAA GTATGATTTA
ATTCAGCCGT CTGATTACAT GGTTAAAACA ATGGCGAAAA TGGATTTATT AGCGCCGTTA
GATAAAAAGA ATATCCCAAA TATCGAAAAC ATGATTTCTA ATTTCAAAAC ACCTGCATTT
GATCCAGAGA ATAAATATTC TTTAGTATAT ACTTGGGGCG TAACAGGTAT TGCATACAAT
AAAAAGTATG TGAAGGAAGC ACCTACAAGC TGGGCTGACT TATGGAATGA GAAATATAAA
GGGCATGTAA CTTTATTAAA TGATTCTCGT GAAGTGTTAG GAATGGGTCT TAAGAAGCAT
GGATTTTCAA ACAGCACGAA AGACGATGCA CAGTTAAAGA CAGCAGCAAC TGATTTACAG
AAGCTACTTC CAAACTTATT AGCATTTGAT ACAGATAATA TTAAACAAAA ATTCATTACA
GAAGATGCTT GGATCGGAAC AGTTTGGTCT GGGGATGCAG CATTTATCGC AAAAGATAAT
AAAGATGTAG AGTACGTTGT GCCAAAAGAA GGCGGCACAA TTTGGGCTGA TACGTTAGCA
ATTCCAAAAG GTGCGAAAAA CAAAGAGCTT GCAGAGAAGT TTATGAACTA CTTATTAGAT
GAAAAAGTAA GTGTGAAAAA CTACGAGTCA ATTGGATACA GTAATCCAAA TGAAAAAGCT
CACCCTCTTC ATAGTAAAGA ATATCGTGAA AACCACATGA TCTTCTTAAC GAAAGAAGAA
TTAGATCGTA CTGAATGGCT TGTTGATGTA GACGATAAGC TAAAAGACTA CGATCGTTAC
TGGACAGAGT TAAAAACAAA AGGTAAATAA
 
Protein sequence
MKLMKRLAGA AISFSLVAGV LAGCGEKKEE LNIYSWADNF DEQVLRDFEK KYNVKINYDK 
YASNEEMLAK LQAGGAKYDL IQPSDYMVKT MAKMDLLAPL DKKNIPNIEN MISNFKTPAF
DPENKYSLVY TWGVTGIAYN KKYVKEAPTS WADLWNEKYK GHVTLLNDSR EVLGMGLKKH
GFSNSTKDDA QLKTAATDLQ KLLPNLLAFD TDNIKQKFIT EDAWIGTVWS GDAAFIAKDN
KDVEYVVPKE GGTIWADTLA IPKGAKNKEL AEKFMNYLLD EKVSVKNYES IGYSNPNEKA
HPLHSKEYRE NHMIFLTKEE LDRTEWLVDV DDKLKDYDRY WTELKTKGK