| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A3931 |
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| Symbol | topA |
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| ID | 7099832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus B4264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011725 |
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| Strand | - |
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| Start bp | 3853017 |
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| End bp | 3855095 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643471454 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002368634 |
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| Protein GI | 218232018 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000332787 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATT ACCTCGTAAT CGTGGAGTCG CCTTCTAAGG CGAAGACCAT TGAGAAATAT
TTAGGGAAAA AATACAAAGT TGTCGCGTCT ATGGGACATG TTCGCGATTT GCCAAAAAGT
CAAATGGGGA TAGAAGTAAA GAACAACTTC ACCCCGAAGT ATATTACCAT TCGTGGTAAA
GGTCCCGTCT TAAAAGATTT AAAATCAGCG GCGAAAAAAG CAAAGAAAGT CTATCTCGCG
GCCGATCCAG ACCGTGAAGG GGAAGCAATT GCTTGGCATT TAGCGAATAC GTTAAATGTG
GACGTTGAAT CAGATTGTCG GGTTGTGTTT AATGAGATTA CGAAAGATGC AATCAAAGAA
TCATTTAAAC ATCCTCGTGC AATTAATATG GATTTAGTGG ATGCACAACA AGCAAGACGT
ATACTTGATC GTCTTGTTGG TTACAATATT AGTCCTTTAT TATGGAAGAA AGTAAAAAAA
GGATTAAGTG CAGGACGTGT ACAATCTGTA GCAGTTCGTT TAATCATCGA GCGTGAAAGG
GAAATTCAAA ACTTTGAACC TGAAGAATTC TGGACAATTA AAACAGAATT TGTAAAAGGA
AAAGACACAT TTGAAGCAAG CTTTTACGGT GTAGATGGTG AAAAAGTTCA ATTAACAAAT
GAAACGCAAG TGAATGAAAT AATTGAACAG ATGAAAGACA ATGCGTTTTC AGTTGAAAAT
GTAACGCGCA AAGAGCGAAA ACGTAATCCT GCATTACCGT TTACAACATC TTCCTTGCAA
CAAGAAGCAG CACGTAAGTT AAACATGCGA GCAAAGAAAA CAATGATGCT TGCACAGCAA
TTGTATGAAG GGATAGATCT TGGAAAACAA GGAACTGTAG GTCTTATTAC GTATATGAGA
ACTGATTCAA CACGTATCTC AGAAACAGCT CAAACAGAGG CTCGTACTTA CATCACTGAA
GCGTATGGTA CGGAATACAT AGGAACAGAA AAGAAGAAAG AAACGAAAAA GTCAAATGCA
CAAGATGCGC ATGAGGCAAT TCGTCCTACT TCAGTAATGA GAAAGCCAGA GGAACTAAAA
AGTTTCTTAG GTCGTGATCA ACTTCGATTA TATAAATTGA TTTGGGAGCG ATTTGTTGCA
AGTCAAATGG CGTCTGCTAT AATGGATACT GTGACAGCGA GACTCATTAA TAACAATGTT
CAGTTCCGTG CAAGTGGATC GGTTGTAAAG TTCCCAGGAT TTATGAAAGT GTATGTAGAG
TCAAAAGATG ATGGTGCTGA AGAAAAGGAT AAGATGTTGC CACCTTTAGA AGTAGGGGAA
ACTGTATTTT CAAAGGATTT AGAACCAAAG CAACATTTTA CACAACCTCC TCCGCGCTAT
ACAGAGGCTC GCCTAGTAAG AACACTTGAA GAACTTGGAA TTGGAAGACC GTCAACATAT
GTACCTACAC TTGAAACAAT TCAAAAGCGT GGGTATGTAG GTTTGGATAA TAAACGCTTC
GTTCCGACTG AACTTGGTGA AATAGTAATT GAACTTATTT TAGAGTTTTT CCCAGAAATT
ATTAACATTG AATTTACTGC CAATATGGAG CAAAGCCTTG ATGAAGTAGA AGAAGGAAAT
GCGAATTGGG TAAAAATTGT TGATGATTTC TACGTAGGTT TTGAACCGCG TTTAGAAAAA
GCGGAAAAAG AAATGCGTGA AGTGGAAATT AAAGATGAAC CAGCTGGGGA AGATTGTGAA
TTATGTAATC ACCCAATGGT CTTTAAAATG GGTAAATACG GGAAATTTAT GGCTTGCTCG
AATTTCCCAG ATTGTCGTAA TACAAAGCCG ATTGTGAAAG AAATCGGTGT TACTTGTCCA
AAGTGTGATA AGGGTCAAAT TATTGAACGC CGTAGTAATA AAAAGAAACG TCTTTTCTAT
GGGTGCGGTA CGTATCCGGA ATGCGACTTT GTATCTTGGG ATAAGCCAAT TGGTCGTAAG
TGTCCGAAGT GCGAAGGCAT GCTTGTAGAG AAAAAGTTGA AAAAAGGCGT GCAAGTACAA
TGTATTTCGT GCGATTATGA AGAAGAACAA CAAATGTGA
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| Protein sequence | MSDYLVIVES PSKAKTIEKY LGKKYKVVAS MGHVRDLPKS QMGIEVKNNF TPKYITIRGK
GPVLKDLKSA AKKAKKVYLA ADPDREGEAI AWHLANTLNV DVESDCRVVF NEITKDAIKE
SFKHPRAINM DLVDAQQARR ILDRLVGYNI SPLLWKKVKK GLSAGRVQSV AVRLIIERER
EIQNFEPEEF WTIKTEFVKG KDTFEASFYG VDGEKVQLTN ETQVNEIIEQ MKDNAFSVEN
VTRKERKRNP ALPFTTSSLQ QEAARKLNMR AKKTMMLAQQ LYEGIDLGKQ GTVGLITYMR
TDSTRISETA QTEARTYITE AYGTEYIGTE KKKETKKSNA QDAHEAIRPT SVMRKPEELK
SFLGRDQLRL YKLIWERFVA SQMASAIMDT VTARLINNNV QFRASGSVVK FPGFMKVYVE
SKDDGAEEKD KMLPPLEVGE TVFSKDLEPK QHFTQPPPRY TEARLVRTLE ELGIGRPSTY
VPTLETIQKR GYVGLDNKRF VPTELGEIVI ELILEFFPEI INIEFTANME QSLDEVEEGN
ANWVKIVDDF YVGFEPRLEK AEKEMREVEI KDEPAGEDCE LCNHPMVFKM GKYGKFMACS
NFPDCRNTKP IVKEIGVTCP KCDKGQIIER RSNKKKRLFY GCGTYPECDF VSWDKPIGRK
CPKCEGMLVE KKLKKGVQVQ CISCDYEEEQ QM
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