| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_5225 |
|---|
| Symbol | cggR |
|---|
| ID | 7187834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | - |
|---|
| Start bp | 4926873 |
|---|
| End bp | 4927901 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643558636 |
|---|
| Product | gapA transcriptional regulator CggR |
|---|
| Protein accession | YP_002454147 |
|---|
| Protein GI | 218906313 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 164 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCAT GGATTCAGAA CACAAAAAAA TTATTACCTG ATCTGCTACC TGTTATGCAA
ACGAGAATGC AAATTCTTCA ATACATTAGG CTCATGCAGC CGATTGGAAG AAGAAACTTA
TCAGCAAGTC TCGGTATGAC AGAACGAGTA TTGCGAAGTG AAGTTCAAGT TTTGAAAGAA
CAAAACTTAG TTCACGTCGC TTCTTCTGGA ATGACATTGA CAGAAGAAGG AACAGCTTTA
GTTCTTGCTT TGGAAGACTT TATGAAAGAA ATTTCCGGGT TAAAGGTTTT AGAAAAGCAA
CTTAAGGAAA CATTAGACTT GGATGAAGTT TTCGTTGTCC CTGGTGATAG TGATGAATCG
CCTTGGGTCA AACTGGAGAT GGGCCGTGCT TGTGTGACTT GTATAAAAGA CCGTCTGACA
GCGAATAATA TCGTTGCTGT GGCTGGAGGA ACTACGCTAG CTGCTGTTGC GGACATGATG
CAGCTTGATT GCAAAGATTT ACATATGCTA TTTGTCCCAG CACGTGGTGG AATTGGAGAA
GGCGTTGAAT TAGAAGCCAA TACCATTTGT GCCAAAATGG CGCAAAATAC GATGAGTAAT
TATCGCTTAT TGTATGTCCC AGACCATGTT AGCAGCGAAG CATATGCGTC TATTGTGACA
GAGCCTTCCG TGAAAGAAGT TCTTGAGTTG ATTCGATCTT CCAATATCGT CATTCATGGA
ATAGGTGATG CGTTAACAAT GGCACGTCGC AGAAATACTT CAGAAGCAGA TTGGTTAAAG
ATTCAGGCAA GCGAAGCAGT TGGCGAAGCT TTCGGTTACT ACTTTAATGA ACAAGGAAAT
GTTGTTCATA AAGTAAGAAC AGTTGGTATG CAACTAGAGG ATTTACAAAA TGTATCTCAC
GTTGTTGCAG TCGCTGGAGG TTCTTCAAAG GCAAAGGCAA TACAGGCTGT AATTAAACAA
GGGCACACTT CAATTCTAAT TACAGATGAA GGTGCAGCAA AACAGTTAAC AAAGGGTATT
ACCCTTTAA
|
|---|
| Protein sequence | MRSWIQNTKK LLPDLLPVMQ TRMQILQYIR LMQPIGRRNL SASLGMTERV LRSEVQVLKE
QNLVHVASSG MTLTEEGTAL VLALEDFMKE ISGLKVLEKQ LKETLDLDEV FVVPGDSDES
PWVKLEMGRA CVTCIKDRLT ANNIVAVAGG TTLAAVADMM QLDCKDLHML FVPARGGIGE
GVELEANTIC AKMAQNTMSN YRLLYVPDHV SSEAYASIVT EPSVKEVLEL IRSSNIVIHG
IGDALTMARR RNTSEADWLK IQASEAVGEA FGYYFNEQGN VVHKVRTVGM QLEDLQNVSH
VVAVAGGSSK AKAIQAVIKQ GHTSILITDE GAAKQLTKGI TL
|
|---|
| |