| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_4853 |
|---|
| Symbol | gerHB |
|---|
| ID | 7189155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | + |
|---|
| Start bp | 4589903 |
|---|
| End bp | 4590997 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643558263 |
|---|
| Product | spore germination protein GerHB |
|---|
| Protein accession | YP_002453799 |
|---|
| Protein GI | 218905965 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 326 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TTCAAGAAAA ATATCAAATA TCTCCTATCT TCGTTTTCTT CTTAATTCAC
GGTGCACAGT TTGGAGCTGG CGTTCTCGGC TTCGCTAGAA TCATCGCAAA GGCCGCTGGA
TACGACGGAT GGATGGGCGT TCTAATCACA GGACTCTGTA TCCATCTCCT TATATGGATG
ATGTATTTTT TATTAAAAGA AACAAATGGA AATTTAATCG ATTTACAAAG GCAAACGTTT
GGAAAGTGGA TAGGGAATGT CTTTAATATC ATTTTTGCAG CTTATTTTTT AATCGTTAGT
ATTTCCGTTA TTCGAACGTA TGTCGAAATT ATTCAAGTAT GGATGTTTCC TACCGCTTCC
ACCTTTATGT TAACACTCTT TTTGTGCTTA GTTAGCTATT ACATTATCTC TTCTGGATTT
CGTGTCATTA CTGGCATTTG TGTCATCTCT GTCGGTGGTA CAATTGGGTA TTTGTTTCTG
AGCCTATTTG TTTTGAAATA CTCACATTGG GACAACTTAC TCCCTATATT TACACATTCT
TTTTCAGACA TTTTAAAATC CGCTCAACTG TCAATCTACA GTATGACCGG TTTTGAGATT
TACCTCATGG TGTATCCATT TGTTAAAAAG CCTATGCAAT CTCATAAATA CGCTCAGCTT
GGAGCACTAT TTTCAAATCT TCTATATCTA TTTAGCACCC TTTTAGCCTT TGCATTTTTT
AGTGAAAAAC AATTGTTAAA AACGATATGG GCCCAACTTT CTATGACCCA AGTCATTCAA
TTACCATTTA TAGAAAGACT CGAATATATC GCAATTTCAG GCTATGCACT CGTTATTATT
TCAAGTTTTA TCCTCCCTTT ATGGGCGTCA ATGAGAGCAA CGCATGAAAT ATTCCGTGTA
AAACAAAGAG GTATTTTAAT CGCTTTTATC ATTATCACTC TCATTGTTTC GCAACTTTTA
ACAAACAGAC AAGATATTAA TAACTTTATT AGTAATGCAT CGAAGGTTAG TTTTTGGCTC
ATTTACGTAT ACATCCCAAT CCTATTTATT ATTGTGTGGG TGAAAAGAAA ATGGAAAAAA
TCAAAAGCAA ATTAG
|
|---|
| Protein sequence | MSKVQEKYQI SPIFVFFLIH GAQFGAGVLG FARIIAKAAG YDGWMGVLIT GLCIHLLIWM
MYFLLKETNG NLIDLQRQTF GKWIGNVFNI IFAAYFLIVS ISVIRTYVEI IQVWMFPTAS
TFMLTLFLCL VSYYIISSGF RVITGICVIS VGGTIGYLFL SLFVLKYSHW DNLLPIFTHS
FSDILKSAQL SIYSMTGFEI YLMVYPFVKK PMQSHKYAQL GALFSNLLYL FSTLLAFAFF
SEKQLLKTIW AQLSMTQVIQ LPFIERLEYI AISGYALVII SSFILPLWAS MRATHEIFRV
KQRGILIAFI IITLIVSQLL TNRQDINNFI SNASKVSFWL IYVYIPILFI IVWVKRKWKK
SKAN
|
|---|
| |