| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_3565 |
|---|
| Symbol | |
|---|
| ID | 7191155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | - |
|---|
| Start bp | 3400626 |
|---|
| End bp | 3402479 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643556976 |
|---|
| Product | putative squalene-hopene cyclase |
|---|
| Protein accession | YP_002452515 |
|---|
| Protein GI | 218904681 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1657] Squalene cyclase |
|---|
| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 121 |
|---|
| Fosmid unclonability p-value | 0.143016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTATTAT ACGAAAAAGC GCATGAAGAA ATAGTGAGAA GAGCAACAGC ACTTCAAACA
ATGCAATGGC AAGATGGTAC GTGGCGATTT TGTTTTGAAG GAGCTCCATT AACAGATTGC
CATATGATTT TTTTATTAAA ATTATTAGGT AGAGATAAAG AGATAGAACC GTTCGTAGAA
AGAGTAGCAT CACTCCAAAC AAATGAAGGA ACATGGAAAT TGCACGAAGA TGAAGTAGGA
GGTAATTTAT CAGCTACAAT TCAATCTTAT GCCGCCTTAC TTGCATCGAA AAAATATACA
AAAGAAGATG CGAATATGAA ACGAGCAGAA AATTTTATTC AGGAACGCGG TGGTGTGGCG
CGTGCTCATT TTATGACGAA GTTTTTATTA GCAATTCATG GAGAATATGA ATATCCTTCA
CTCTTTCATT TACCAACACC AATCATGTTT CTACAGAATG ATTCCCCCTT TAGTATATTT
GAATTAAGTA GCTCAGCACG TATTCATTTA ATTCCGATGA TGCTATGTTT AAATAAAAGA
TTTCGAGTAG GGAAAAAGTT ATTACCAAAT TTAAATCACA TTGCGGGCGG AGGCGGAGAA
TGGTTTCGGG AGGATCGGTC TCCAGTTTTT CAAACGTTAT TAAGTGATGT AAAACAAATT
ATATCGTATC CACTTTCGTT ACATCATAAA GGATATGAGG AAATAGAACG TTTTATGAAA
GAGCGTATTG ATGAAAATGG AACGTTATAT AGTTACGCAA CTGCCTCGTT TTATATGATT
TATGCTTTAC TTGCGTTAGG GCATTCTCTT CAATCATCAA TGATTCAAAA GGCTATAGCT
GGGATAACAT CTTATATATG GAAGATGGAA AGAGGGAATC ATTTGCAAAA CTCTCCTTCA
ACCGTGTGGG ATACAGCTTT ATTAAGCTAT GCGTTACAAG AGGCTCAAGT TTCAAAGGAT
AATAAGATGA TTCAAAATGC AACAGCGTAT TTATTAAAAA AACAGCATAC AAAAAAAGCT
GATTGGAGCG TACATGCTCC GGCACTTACT CCTGGCGGTT GGGGTTTTTC GGATGTGAAT
ACGACAATTC CAGATATAGA TGATACAACA GCTGTGCTAA GGGCATTGGC ACGAAGTAGA
GGAAACAAAA ATATAGATAA TGCTTGGAAG AAAGGGGTCA ATTGGATTAA AGGATTACAA
AACAATGATG GTGGCTGGGG AGCATTTGAA AAAGGTGTGA CGAGCAAATT ATTAGCAAAA
TTACCAATCG AAAATGCAAG TGATATGATT ACAGATCCTT CTACGCCAGA TATTACGGGG
AGAGTGTTAG AGTTTTTCGG GACGTATGCA CAAAACGAAT TGCCTGAGAA ACAGATACAA
AGGGCAATAA ATTGGTTAAT GAATGTACAA GAGGAAAATG GATCATGGTA TGGGAAATGG
GGGATTTGTT ATCTATATGG TACGTGGGCT GTTATGACTG GTTTACGGTC ACTCGGAATT
CCGTCTAGCA ATCCTTCATT GACACGAGCA TCTTCATGGC TTGAACATAT ACAGCATGAA
GATGGTGGTT GGGGAGAATC ATGCCACAGT AGTGTGGAGA AAAGGTTCGT TACTTTACCA
TTTAGTACAC CATCCCAAAC TGCATGGGCG TTAGATGCTC TCATTTCTTA CTATGATACA
GAAACGCCAG CTATTCGAAA AGGTGTTTCA TATTTGCTTT CGAATCCTTA TGTGAATGAA
AGATATCCTA CTGGAACAGG TTTACCAGGT GCGTTTTATA TTAGGTATCA TAGCTATGCC
CATATATATC CACTACTTAC TTTGGCACAT TATATAAAAA AATATAGAAA ATAA
|
|---|
| Protein sequence | MLLYEKAHEE IVRRATALQT MQWQDGTWRF CFEGAPLTDC HMIFLLKLLG RDKEIEPFVE
RVASLQTNEG TWKLHEDEVG GNLSATIQSY AALLASKKYT KEDANMKRAE NFIQERGGVA
RAHFMTKFLL AIHGEYEYPS LFHLPTPIMF LQNDSPFSIF ELSSSARIHL IPMMLCLNKR
FRVGKKLLPN LNHIAGGGGE WFREDRSPVF QTLLSDVKQI ISYPLSLHHK GYEEIERFMK
ERIDENGTLY SYATASFYMI YALLALGHSL QSSMIQKAIA GITSYIWKME RGNHLQNSPS
TVWDTALLSY ALQEAQVSKD NKMIQNATAY LLKKQHTKKA DWSVHAPALT PGGWGFSDVN
TTIPDIDDTT AVLRALARSR GNKNIDNAWK KGVNWIKGLQ NNDGGWGAFE KGVTSKLLAK
LPIENASDMI TDPSTPDITG RVLEFFGTYA QNELPEKQIQ RAINWLMNVQ EENGSWYGKW
GICYLYGTWA VMTGLRSLGI PSSNPSLTRA SSWLEHIQHE DGGWGESCHS SVEKRFVTLP
FSTPSQTAWA LDALISYYDT ETPAIRKGVS YLLSNPYVNE RYPTGTGLPG AFYIRYHSYA
HIYPLLTLAH YIKKYRK
|
|---|
| |